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Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS05730 and ABIE51_RS05735 are separated by 107 nucleotides
ABIE51_RS05735 and ABIE51_RS05740 are separated by 54 nucleotides
ABIE51_RS05740 and ABIE51_RS05745 are separated by 75 nucleotides
ABIE51_RS05745 and ABIE51_RS05750 are separated by 128 nucleotides
ABIE51_RS05730: ABIE51_RS05730 - ribose-phosphate diphosphokinase, at 1,231,371 to 1,232,330
_RS05730
ABIE51_RS05735: ABIE51_RS05735 - 50S ribosomal protein L25/general stress protein Ctc, at 1,232,438 to 1,233,091
_RS05735
ABIE51_RS05740: ABIE51_RS05740 - aminoacyl-tRNA hydrolase, at 1,233,146 to 1,233,724
_RS05740
ABIE51_RS05745: ABIE51_RS05745 - redox-regulated ATPase YchF, at 1,233,800 to 1,234,891
_RS05745
ABIE51_RS05750: ABIE51_RS05750 - tRNA-Tyr, at 1,235,020 to 1,235,105
_RS05750
Group
Condition
ABIE51
_RS05730
ABIE51
_RS05735
ABIE51
_RS05740
ABIE51
_RS05745
ABIE51
_RS05750
r2a no stress control
R2A no stress control
N.D.
N.D.
N.D.
-1.0
N.D.
dmso control
DMSO control
N.D.
N.D.
N.D.
-0.9
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
N.D.
N.D.
N.D.
-0.9
N.D.
dmso control
DMSO control
N.D.
N.D.
N.D.
-0.9
N.D.
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
N.D.
N.D.
-0.8
N.D.
dmso control
DMSO control
N.D.
N.D.
N.D.
-0.8
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
N.D.
N.D.
N.D.
-0.8
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
N.D.
N.D.
-0.7
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
N.D.
-0.7
N.D.
dmso control
DMSO control
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
N.D.
-0.7
N.D.
r2a no stress control
R2A no stress control
N.D.
N.D.
N.D.
-0.7
N.D.
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
N.D.
-0.7
N.D.
carbon source
Ying_sugar7 rep A; time point 3
N.D.
N.D.
N.D.
-0.7
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
N.D.
N.D.
-0.7
N.D.
carbon source
Ying_sugar7 rep C; time point 3
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
N.D.
-0.6
N.D.
r2a no stress control
R2A no stress control
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
N.D.
-0.6
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
N.D.
N.D.
N.D.
-0.6
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
N.D.
-0.6
N.D.
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