Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 143 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
ABIE51_RS05545 and ABIE51_RS05550 are separated by 126 nucleotides
ABIE51_RS05550 and ABIE51_RS05555 are separated by 130 nucleotides
ABIE51_RS05555 and ABIE51_RS05560 overlap by 4 nucleotides
ABIE51_RS05560 and ABIE51_RS05565 are separated by 254 nucleotides
ABIE51_RS05545: ABIE51_RS05545 - RNA polymerase sigma factor, at 1,197,425 to 1,197,940
_RS05545
ABIE51_RS05550: ABIE51_RS05550 - hypothetical protein, at 1,198,067 to 1,198,423
_RS05550
ABIE51_RS05555: ABIE51_RS05555 - NAD(P) transhydrogenase subunit alpha, at 1,198,554 to 1,198,865
_RS05555
ABIE51_RS05560: ABIE51_RS05560 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 1,198,862 to 1,200,253
_RS05560
ABIE51_RS05565: ABIE51_RS05565 - hypothetical protein, at 1,200,508 to 1,200,990
_RS05565
Group
Condition
ABIE51
_RS05545
ABIE51
_RS05550
ABIE51
_RS05555
ABIE51
_RS05560
ABIE51
_RS05565
carbon source
L-Malic (C)
+0.2
-4.4
+1.1
-0.1
+0.4
carbon source
D-Cellobiose (C)
-0.2
-0.4
-1.3
-0.2
-0.3
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
+0.0
-2.9
+0.2
+0.1
+0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.2
-2.2
-0.1
+0.0
-0.2
carbon source
D-Galactose (C)
+0.2
+0.7
-2.5
-0.5
+0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-1.1
-0.2
-0.2
-0.1
stress
R2A with 3-octanone 2.65516666666667 mM
-0.5
-0.6
-0.9
+0.3
+0.0
carbon source
Ying_all64 rep B; time point 3
-0.4
-1.7
+0.3
+0.1
-0.0
carbon source
Ying_sugar7 rep C; time point 2
+0.1
+0.3
-1.6
-0.3
-0.2
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.2
-1.8
+0.2
+0.1
+0.1
carbon source
pyruvate (C)
+0.3
-0.4
-1.0
-0.1
-0.1
carbon source
L-Tryptophan (C)
-0.1
-0.3
-1.1
+0.0
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.2
-1.4
+0.3
+0.2
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.3
-1.5
+0.8
-0.3
-0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.2
-1.3
+0.6
-0.0
-0.2
carbon source
Ying_sugar7 rep A; time point 2
+0.1
+0.5
-1.1
-0.2
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.6
-0.5
+0.2
+0.2
+0.2
carbon source
propionate (C)
-0.7
-0.4
+0.8
-0.0
-0.1
carbon source
pyruvate (C)
-0.2
-1.1
+0.6
+0.1
+0.2
carbon source
Ying_Others16 rep A; time point 1
-0.3
+0.7
-0.9
+0.1
+0.1
carbon source
D-Glucuronic Acid (C)
-0.2
-1.8
+1.4
+0.0
+0.3
carbon source
Fumarate (C)
+0.2
+0.4
-1.0
-0.1
+0.3
carbon source
Ying_all64 rep A; time point 1
+0.2
+0.6
-0.9
-0.1
-0.1
stress
R2A with 3-octanone 2.65516666666667 mM
+0.0
+0.6
-1.0
-0.1
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.5
+0.8
-0.5
+0.0
+0.1
carbon source
succinate (C)
-0.3
+0.8
-0.0
+0.2
-0.7
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.4
-0.6
+0.8
+0.2
+0.2
carbon source
Ying_OrganicAcid7 rep C; time point 1
+0.1
+1.1
-0.5
-0.1
-0.1
dmso control
DMSO control
+0.2
-0.5
+0.6
+0.2
+0.3
carbon source
D-Maltose (C)
+0.1
+0.5
+0.9
-0.1
+0.4
remove
ABIE51_RS05545
plot
remove
ABIE51_RS05550
plot
remove
ABIE51_RS05555
remove
ABIE51_RS05560
plot
remove
ABIE51_RS05565
plot