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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS05385 and ABIE51_RS05390 are separated by 7 nucleotides
ABIE51_RS05390 and ABIE51_RS05395 are separated by 11 nucleotides
ABIE51_RS05395 and ABIE51_RS05400 overlap by 4 nucleotides
ABIE51_RS05400 and ABIE51_RS05405 are separated by 129 nucleotides
ABIE51_RS05385: ABIE51_RS05385 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA, at 1,164,743 to 1,165,567
_RS05385
ABIE51_RS05390: ABIE51_RS05390 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 1,165,575 to 1,166,567
_RS05390
ABIE51_RS05395: ABIE51_RS05395 - peptidylprolyl isomerase, at 1,166,579 to 1,167,940
_RS05395
ABIE51_RS05400: ABIE51_RS05400 - LPS assembly protein LptD, at 1,167,937 to 1,170,399
_RS05400
ABIE51_RS05405: ABIE51_RS05405 - peptide-methionine (R)-S-oxide reductase MsrB, at 1,170,529 to 1,170,948
_RS05405
Group
Condition
ABIE51
_RS05385
ABIE51
_RS05390
ABIE51
_RS05395
ABIE51
_RS05400
ABIE51
_RS05405
carbon source
D-Galactose (C)
-0.9
N.D.
N.D.
N.D.
-0.4
carbon source
Ying_AminoAcid20 rep A; time point 3
-1.2
N.D.
N.D.
N.D.
+0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.9
N.D.
N.D.
N.D.
-0.2
carbon source
pyruvate (C)
-0.7
N.D.
N.D.
N.D.
-0.2
carbon source
D-Maltose (C)
-0.9
N.D.
N.D.
N.D.
-0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.7
N.D.
N.D.
N.D.
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.9
N.D.
N.D.
N.D.
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.6
N.D.
N.D.
N.D.
-0.2
carbon source
casaminos (C)
-0.7
N.D.
N.D.
N.D.
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.6
N.D.
N.D.
N.D.
-0.2
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.7
N.D.
N.D.
N.D.
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.6
N.D.
N.D.
N.D.
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.8
N.D.
N.D.
N.D.
+0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.7
N.D.
N.D.
N.D.
+0.0
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.5
N.D.
N.D.
N.D.
-0.1
carbon source
D-Maltose (C)
-0.6
N.D.
N.D.
N.D.
+0.0
r2a no stress control
R2A no stress control
-0.5
N.D.
N.D.
N.D.
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.9
N.D.
N.D.
N.D.
+0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.2
N.D.
N.D.
N.D.
-0.3
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.4
N.D.
N.D.
N.D.
-0.1
dmso control
DMSO control
-0.3
N.D.
N.D.
N.D.
-0.3
carbon source
Ying_sugar7 rep A; time point 3
-0.7
N.D.
N.D.
N.D.
+0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.6
N.D.
N.D.
N.D.
+0.0
carbon source
acetate (C)
-0.4
N.D.
N.D.
N.D.
-0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
-0.4
N.D.
N.D.
N.D.
-0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.5
N.D.
N.D.
N.D.
+0.1
carbon source
Ying_sugar7 rep C; time point 3
-0.6
N.D.
N.D.
N.D.
+0.2
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.6
N.D.
N.D.
N.D.
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.4
N.D.
N.D.
N.D.
+0.1
carbon source
succinate (C)
-0.3
N.D.
N.D.
N.D.
+0.2
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