Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS05280 and ABIE51_RS05285 are separated by 35 nucleotidesABIE51_RS05285 and ABIE51_RS05290 are separated by 21 nucleotidesABIE51_RS05290 and ABIE51_RS05295 are separated by 106 nucleotidesABIE51_RS05295 and ABIE51_RS05300 are separated by 9 nucleotides ABIE51_RS05280: ABIE51_RS05280 - nucleoside triphosphate pyrophosphohydrolase, at 1,147,414 to 1,148,277 _RS05280 ABIE51_RS05285: ABIE51_RS05285 - DUF962 domain-containing protein, at 1,148,313 to 1,148,615 _RS05285 ABIE51_RS05290: ABIE51_RS05290 - DMT family protein, at 1,148,637 to 1,148,978 _RS05290 ABIE51_RS05295: ABIE51_RS05295 - response regulator transcription factor, at 1,149,085 to 1,149,801 _RS05295 ABIE51_RS05300: ABIE51_RS05300 - HAMP domain-containing sensor histidine kinase, at 1,149,811 to 1,151,088 _RS05300
Group Condition ABIE51_RS05280 ABIE51_RS05285 ABIE51_RS05290 ABIE51_RS05295 ABIE51_RS05300
carbon source Ying_all64 rep A; time point 2 -0.0 -0.0 +0.1 -4.4 -5.8
carbon source Ying_all64 rep B; time point 2 -0.4 +0.1 +0.2 -4.3 -5.3
carbon source Ying_all64 rep C; time point 2 -0.2 +0.2 +0.1 -3.9 -5.4
carbon source Ying_sugar7 rep A; time point 2 +0.0 -0.0 +0.4 -4.3 -5.2
carbon source Ying_sugar7 rep C; time point 2 +0.2 +0.2 +0.3 -4.2 -5.3
carbon source Ying_sugar7 rep B; time point 2 -0.1 +0.3 +0.2 -3.8 -5.2
carbon source Ying_AminoAcid20 rep B; time point 2 +0.2 +0.2 +0.1 -3.3 -5.6
carbon source Ying_all64 rep B; time point 1 -0.0 -0.1 +0.1 -3.7 -4.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.1 -0.2 +0.3 -3.5 -4.7
carbon source Ying_all64 rep C; time point 1 -0.0 -0.2 +0.1 -3.7 -4.1
carbon source Ying_AminoAcid20 rep A; time point 1 +0.1 -0.1 +0.2 -2.5 -5.6
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 -0.0 +0.3 -2.5 -5.6
carbon source Ying_AminoAcid20 rep C; time point 2 +0.2 +0.1 +0.2 -2.3 -5.9
carbon source Ying_sugar7 rep A; time point 3 -0.1 +0.5 +0.3 -2.7 -5.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 -0.0 +0.3 -3.1 -4.8
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.0 +0.1 -0.0 -4.2 -3.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 -0.1 +0.3 -2.5 -5.2
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.0 -0.2 +0.1 -3.4 -3.9
carbon source Ying_all64 rep A; time point 1 +0.0 +0.2 +0.1 -3.1 -4.6
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.5 -0.1 +0.3 -2.6 -4.4
carbon source Ying_sugar7 rep C; time point 3 -0.0 +0.3 +0.0 -2.6 -4.8
carbon source Ying_AminoAcid20 rep B; time point 1 -0.1 +0.3 +0.1 -2.4 -5.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 +0.1 -0.1 -2.4 -4.7
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 +0.2 +0.4 -2.0 -5.4
carbon source Ying_sugar7 rep B; time point 3 +0.1 +0.5 +0.2 -2.7 -5.0
carbon source Ying_all64 rep C; time point 3 +0.0 +0.3 +0.2 -2.0 -5.2
carbon source Ying_all64 rep A; time point 3 +0.1 +0.5 +0.2 -2.2 -4.5
stress R2A with 2-pentyl-furan 32.0526 mM +0.3 -0.2 -0.2 -5.9 +1.4
stress R2A with 2-pentyl-furan 32.0526 mM +0.2 -0.2 -0.3 -4.7 +2.2
stress R2A with 2-pentyl-furan 32.0526 mM +0.2 +0.0 -0.2 -4.4 +2.7
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ABIE51_RS05280
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