Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS05025 and ABIE51_RS05030 are separated by 53 nucleotidesABIE51_RS05030 and ABIE51_RS05035 are separated by 37 nucleotidesABIE51_RS05035 and ABIE51_RS05040 are separated by 30 nucleotidesABIE51_RS05040 and ABIE51_RS05045 are separated by 169 nucleotides ABIE51_RS05025: ABIE51_RS05025 - GNAT family N-acetyltransferase, at 1,089,983 to 1,090,492 _RS05025 ABIE51_RS05030: ABIE51_RS05030 - alpha/beta hydrolase, at 1,090,546 to 1,091,196 _RS05030 ABIE51_RS05035: ABIE51_RS05035 - YebC/PmpR family DNA-binding transcriptional regulator, at 1,091,234 to 1,091,962 _RS05035 ABIE51_RS05040: ABIE51_RS05040 - crossover junction endodeoxyribonuclease RuvC, at 1,091,993 to 1,092,520 _RS05040 ABIE51_RS05045: ABIE51_RS05045 - Holliday junction branch migration protein RuvA, at 1,092,690 to 1,093,280 _RS05045
Group Condition ABIE51_RS05025 ABIE51_RS05030 ABIE51_RS05035 ABIE51_RS05040 ABIE51_RS05045
carbon source L-Malic (C) +0.1 -1.3 -0.7 N.D. -2.2
carbon source Ying_sugar7 rep C; time point 3 +0.1 +0.0 -0.2 N.D. -3.1
carbon source Ying_sugar7 rep C; time point 2 -0.0 +0.3 -0.0 N.D. -3.4
carbon source Ying_sugar7 rep A; time point 3 -0.0 +0.1 -0.1 N.D. -3.1
carbon source Ying_sugar7 rep B; time point 3 -0.1 +0.3 -0.3 N.D. -3.0
carbon source Ying_sugar7 rep B; time point 2 -0.1 +0.7 -0.3 N.D. -3.4
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.1 -1.5 -0.9 N.D. -0.8
carbon source Ying_sugar7 rep A; time point 2 -0.1 +0.5 +0.2 N.D. -3.4
carbon source Ying_sugar7 rep C; time point 1 +0.1 +0.1 -0.2 N.D. -2.6
stress R2A with 2-pentyl-furan 10.6842 mM -0.1 -0.8 -0.2 N.D. -1.4
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 -0.7 -0.5 N.D. -1.4
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM -0.1 -0.3 -0.1 N.D. -1.9
stress R2A with 1-octen-3-ol 1.3568235 mM -0.0 -0.4 -0.3 N.D. -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.1 -0.5 -0.6 N.D. -1.2
carbon source Ying_sugar7 rep A; time point 1 -0.1 +0.4 +0.0 N.D. -2.6
stress R2A with 2-pentyl-furan 32.0526 mM -0.1 -0.0 -0.4 N.D. -1.7
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.2 -0.4 N.D. -1.5
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.0 +0.0 N.D. -2.0
carbon source Fumarate (C) +0.0 -0.3 +1.0 N.D. -2.5
carbon source D-Cellobiose (C) -0.2 -1.1 +0.5 N.D. -0.8
stress R2A with 3-octanone 5.31033333333333 mM -0.0 +0.4 -0.6 N.D. -1.2
carbon source Ying_AminoAcid20 rep C; time point 2 +0.0 +0.1 +0.3 N.D. -1.9
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.2 -0.7 +0.4 N.D. -1.3
carbon source D-Maltose (C) +0.2 +0.4 +0.7 N.D. -2.6
carbon source casaminos (C) -0.1 -0.4 +0.5 N.D. -1.2
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 +0.6 +0.0 N.D. -1.9
carbon source D-Maltose (C) -0.2 -0.9 +1.4 N.D. -1.1
carbon source acetate (C) -0.2 -1.1 +0.6 N.D. +0.3
carbon source L-Tryptophan (C) -0.1 -0.3 +1.1 N.D. -0.7
carbon source succinate (C) -0.0 -0.4 -0.3 N.D. +1.8
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