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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS04975 and ABIE51_RS04980 are separated by 2 nucleotides
ABIE51_RS04980 and ABIE51_RS04985 overlap by 4 nucleotides
ABIE51_RS04985 and ABIE51_RS04990 are separated by 3 nucleotides
ABIE51_RS04990 and ABIE51_RS04995 are separated by 10 nucleotides
ABIE51_RS04975: ABIE51_RS04975 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 1,079,267 to 1,080,313
_RS04975
ABIE51_RS04980: ABIE51_RS04980 - histidine phosphatase family protein, at 1,080,316 to 1,080,864
_RS04980
ABIE51_RS04985: ABIE51_RS04985 - adenosylcobinamide-GDP ribazoletransferase, at 1,080,861 to 1,081,610
_RS04985
ABIE51_RS04990: ABIE51_RS04990 - YceH family protein, at 1,081,614 to 1,082,261
_RS04990
ABIE51_RS04995: ABIE51_RS04995 - YbaL family putative K(+) efflux transporter, at 1,082,272 to 1,083,957
_RS04995
Group
Condition
ABIE51
_RS04975
ABIE51
_RS04980
ABIE51
_RS04985
ABIE51
_RS04990
ABIE51
_RS04995
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.2
N.D.
-0.0
-1.1
-1.5
stress
R2A with 2-pentyl-furan 32.0526 mM
-1.8
N.D.
-0.1
-0.4
-0.1
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.3
N.D.
+0.2
-1.5
-1.0
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.2
N.D.
+0.1
-0.4
-1.9
carbon source
acetate (C)
-0.1
N.D.
-0.3
-0.9
-0.6
carbon source
succinate (C)
-0.8
N.D.
-0.3
-0.8
-0.0
carbon source
Ying_all64 rep A; time point 3
+0.2
N.D.
-0.3
+0.2
-1.9
carbon source
Glucuronamide (C)
-1.2
N.D.
+0.3
-1.6
+0.9
carbon source
Ying_sugar7 rep A; time point 1
+0.4
N.D.
+0.0
-0.7
-1.3
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.3
N.D.
+0.2
-0.5
-1.5
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.4
N.D.
-0.1
-0.7
-0.8
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.4
N.D.
+0.2
-0.8
-0.9
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.2
N.D.
+0.1
-0.6
-0.9
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.8
N.D.
+0.4
-0.8
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.4
N.D.
+0.2
-0.6
-1.1
carbon source
casaminos (C)
+0.1
N.D.
-0.2
-1.3
+0.4
carbon source
Ying_sugar7 rep C; time point 2
+0.4
N.D.
+0.0
+0.1
-1.5
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.0
N.D.
+0.4
-0.7
-0.6
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.4
N.D.
+0.1
-0.0
-1.2
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.4
N.D.
+0.2
-0.9
-0.4
stress
R2A with 3-octanone 1.77016666666667 mM
-0.4
N.D.
+0.2
+0.4
-0.7
carbon source
L-Tryptophan (C)
+0.1
N.D.
-0.2
-1.0
+0.7
carbon source
Fumarate (C)
-0.5
N.D.
+0.3
-0.7
+0.5
carbon source
Ying_all64 rep B; time point 2
+0.4
N.D.
+0.2
-0.1
-0.9
carbon source
Ying_sugar7 rep C; time point 3
+0.6
N.D.
-0.1
+0.1
-0.9
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.7
N.D.
+0.2
+0.6
-0.3
carbon source
Ying_sugar7 rep A; time point 3
+0.7
N.D.
-0.0
+0.3
-0.9
carbon source
Ying_sugar7 rep B; time point 3
+0.5
N.D.
-0.2
+0.4
-0.8
carbon source
D-Glucose-6-Phosphate (C)
+0.1
N.D.
+0.5
-0.9
+0.7
carbon source
2-Deoxy-D-Ribose (C)
-0.2
N.D.
+0.4
-0.3
+0.7
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