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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS04785 and ABIE51_RS04790 are separated by 298 nucleotides
ABIE51_RS04790 and ABIE51_RS04795 are separated by 78 nucleotides
ABIE51_RS04795 and ABIE51_RS04800 are separated by 12 nucleotides
ABIE51_RS04800 and ABIE51_RS04805 are separated by 46 nucleotides
ABIE51_RS04785: ABIE51_RS04785 - M23 family metallopeptidase, at 1,034,301 to 1,035,224
_RS04785
ABIE51_RS04790: ABIE51_RS04790 - preprotein translocase subunit SecA, at 1,035,523 to 1,038,252
_RS04790
ABIE51_RS04795: ABIE51_RS04795 - Nudix family hydrolase, at 1,038,331 to 1,039,335
_RS04795
ABIE51_RS04800: ABIE51_RS04800 - dephospho-CoA kinase, at 1,039,348 to 1,039,965
_RS04800
ABIE51_RS04805: ABIE51_RS04805 - A24 family peptidase, at 1,040,012 to 1,040,875
_RS04805
Group
Condition
ABIE51
_RS04785
ABIE51
_RS04790
ABIE51
_RS04795
ABIE51
_RS04800
ABIE51
_RS04805
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.2
N.D.
-0.2
N.D.
-3.8
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.5
N.D.
+0.0
N.D.
-3.8
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
N.D.
-0.5
N.D.
-3.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
N.D.
-0.3
N.D.
-3.8
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
N.D.
-0.3
N.D.
-3.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.7
N.D.
+0.0
N.D.
-3.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.2
N.D.
+0.1
N.D.
-3.9
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
N.D.
-0.2
N.D.
-3.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.7
N.D.
-0.1
N.D.
-3.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
+0.1
N.D.
-0.3
N.D.
-3.7
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-0.2
N.D.
+0.1
N.D.
-3.7
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
N.D.
-0.1
N.D.
-3.8
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.1
N.D.
-0.1
N.D.
-3.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
N.D.
-0.1
N.D.
-3.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
N.D.
-0.1
N.D.
-3.7
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.2
N.D.
-0.2
N.D.
-3.7
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.3
N.D.
-0.1
N.D.
-3.8
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
N.D.
-0.1
N.D.
-3.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.6
N.D.
+0.2
N.D.
-3.2
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.3
N.D.
-0.1
N.D.
-3.7
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.4
N.D.
-0.3
N.D.
-3.7
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.2
N.D.
-0.2
N.D.
-3.6
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
N.D.
-0.1
N.D.
-3.6
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.4
N.D.
-0.2
N.D.
-3.7
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
N.D.
-0.3
N.D.
-3.3
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.6
N.D.
-0.2
N.D.
-3.7
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.7
N.D.
-0.4
N.D.
-3.3
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.6
N.D.
-0.2
N.D.
-3.3
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.7
N.D.
-0.2
N.D.
-3.2
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.8
N.D.
-0.1
N.D.
-3.4
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