Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS04620 and ABIE51_RS04625 are separated by 101 nucleotidesABIE51_RS04625 and ABIE51_RS04630 overlap by 1 nucleotidesABIE51_RS04630 and ABIE51_RS04635 are separated by 22 nucleotidesABIE51_RS04635 and ABIE51_RS04640 are separated by 484 nucleotides ABIE51_RS04620: ABIE51_RS04620 - serine hydroxymethyltransferase, at 1,001,436 to 1,002,704 _RS04620 ABIE51_RS04625: ABIE51_RS04625 - transcriptional regulator NrdR, at 1,002,806 to 1,003,327 _RS04625 ABIE51_RS04630: ABIE51_RS04630 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 1,003,327 to 1,004,421 _RS04630 ABIE51_RS04635: ABIE51_RS04635 - class I SAM-dependent methyltransferase, at 1,004,444 to 1,005,199 _RS04635 ABIE51_RS04640: ABIE51_RS04640 - riboflavin synthase, at 1,005,684 to 1,006,286 _RS04640
Group Condition ABIE51_RS04620 ABIE51_RS04625 ABIE51_RS04630 ABIE51_RS04635 ABIE51_RS04640
carbon source Ying_sugar7 rep B; time point 2 -6.0 N.D. N.D. +0.2 N.D.
carbon source Ying_sugar7 rep A; time point 2 -5.8 N.D. N.D. +0.2 N.D.
carbon source Ying_sugar7 rep C; time point 2 -5.9 N.D. N.D. +0.4 N.D.
carbon source Ying_sugar7 rep B; time point 3 -5.1 N.D. N.D. -0.3 N.D.
carbon source Ying_sugar7 rep A; time point 3 -5.2 N.D. N.D. -0.2 N.D.
carbon source Ying_sugar7 rep C; time point 3 -5.2 N.D. N.D. -0.1 N.D.
carbon source Ying_sugar7 rep C; time point 1 -4.3 N.D. N.D. +0.2 N.D.
carbon source Ying_sugar7 rep A; time point 1 -4.3 N.D. N.D. +0.2 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 2 -4.5 N.D. N.D. +0.4 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 -3.7 N.D. N.D. +0.2 N.D.
carbon source D-Galactose (C) -3.8 N.D. N.D. +0.2 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 2 -3.6 N.D. N.D. +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -2.9 N.D. N.D. -0.3 N.D.
carbon source D-Glucose-6-Phosphate (C) -3.1 N.D. N.D. +0.0 N.D.
carbon source D-Galactose (C) -3.4 N.D. N.D. +0.3 N.D.
carbon source D-Glucose-6-Phosphate (C) -3.0 N.D. N.D. -0.1 N.D.
carbon source Ying_all64 rep B; time point 3 -2.3 N.D. N.D. -0.6 N.D.
carbon source D-Maltose (C) -2.8 N.D. N.D. -0.1 N.D.
carbon source D-Maltose (C) -2.7 N.D. N.D. -0.1 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -2.2 N.D. N.D. -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -2.7 N.D. N.D. +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -2.7 N.D. N.D. +0.2 N.D.
carbon source casaminos (C) -2.5 N.D. N.D. +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -2.8 N.D. N.D. +0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -2.6 N.D. N.D. +0.2 N.D.
carbon source casaminos (C) -2.5 N.D. N.D. +0.2 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -2.5 N.D. N.D. +0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -2.5 N.D. N.D. +0.4 N.D.
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -2.3 N.D. N.D. +0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -2.4 N.D. N.D. +0.5 N.D.
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