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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS04295 and ABIE51_RS04300 overlap by 4 nucleotides
ABIE51_RS04300 and ABIE51_RS04305 overlap by 11 nucleotides
ABIE51_RS04305 and ABIE51_RS04310 overlap by 4 nucleotides
ABIE51_RS04310 and ABIE51_RS04315 overlap by 4 nucleotides
ABIE51_RS04295: ABIE51_RS04295 - cystathionine gamma-synthase, at 923,987 to 925,165
_RS04295
ABIE51_RS04300: ABIE51_RS04300 - ABC transporter permease, at 925,162 to 926,004
_RS04300
ABIE51_RS04305: ABIE51_RS04305 - ABC transporter ATP-binding protein, at 925,994 to 927,358
_RS04305
ABIE51_RS04310: ABIE51_RS04310 - glycosyltransferase, at 927,355 to 931,488
_RS04310
ABIE51_RS04315: ABIE51_RS04315 - SIS domain-containing protein, at 931,485 to 933,089
_RS04315
Group
Condition
ABIE51
_RS04295
ABIE51
_RS04300
ABIE51
_RS04305
ABIE51
_RS04310
ABIE51
_RS04315
carbon source
Ying_sugar7 rep A; time point 1
-0.7
N.D.
N.D.
-7.1
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.7
N.D.
N.D.
-7.0
N.D.
carbon source
Ying_sugar7 rep A; time point 2
-0.7
N.D.
N.D.
-6.9
N.D.
carbon source
Ying_all64 rep A; time point 2
-0.6
N.D.
N.D.
-7.0
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.6
N.D.
N.D.
-6.0
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.7
N.D.
N.D.
-5.9
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.3
N.D.
N.D.
-6.2
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-0.9
N.D.
N.D.
-5.7
N.D.
carbon source
Ying_sugar7 rep C; time point 2
-0.7
N.D.
N.D.
-5.7
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.4
N.D.
N.D.
-5.7
N.D.
carbon source
Ying_all64 rep C; time point 3
-0.8
N.D.
N.D.
-5.2
N.D.
carbon source
Ying_all64 rep B; time point 2
-0.6
N.D.
N.D.
-5.2
N.D.
carbon source
Ying_all64 rep C; time point 2
-0.6
N.D.
N.D.
-5.2
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.7
N.D.
N.D.
-5.1
N.D.
carbon source
Ying_sugar7 rep C; time point 1
-0.7
N.D.
N.D.
-5.0
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.1
N.D.
N.D.
-5.6
N.D.
carbon source
Ying_all64 rep A; time point 1
-0.5
N.D.
N.D.
-5.2
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.6
N.D.
N.D.
-4.9
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-0.6
N.D.
N.D.
-4.9
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
N.D.
N.D.
-5.2
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-0.7
N.D.
N.D.
-4.7
N.D.
carbon source
Ying_all64 rep C; time point 1
-0.5
N.D.
N.D.
-4.8
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.3
N.D.
N.D.
-4.9
N.D.
carbon source
Ying_all64 rep B; time point 1
-0.7
N.D.
N.D.
-4.5
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.2
N.D.
N.D.
-5.3
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
N.D.
N.D.
-4.9
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.0
N.D.
N.D.
-4.7
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.9
N.D.
N.D.
-3.7
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.6
N.D.
N.D.
-3.9
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.9
N.D.
N.D.
-3.6
N.D.
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