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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS04225 and ABIE51_RS04230 are separated by 227 nucleotides
ABIE51_RS04230 and ABIE51_RS04235 are separated by 26 nucleotides
ABIE51_RS04235 and ABIE51_RS04240 are separated by 27 nucleotides
ABIE51_RS04240 and ABIE51_RS04245 are separated by 213 nucleotides
ABIE51_RS04225: ABIE51_RS04225 - (Fe-S)-binding protein, at 911,528 to 912,721
_RS04225
ABIE51_RS04230: ABIE51_RS04230 - 50S ribosomal protein L13, at 912,949 to 913,377
_RS04230
ABIE51_RS04235: ABIE51_RS04235 - 30S ribosomal protein S9, at 913,404 to 913,796
_RS04235
ABIE51_RS04240: ABIE51_RS04240 - tRNA-Gln, at 913,824 to 913,898
_RS04240
ABIE51_RS04245: ABIE51_RS04245 - fumarylacetoacetate hydrolase family protein, at 914,112 to 915,101
_RS04245
Group
Condition
ABIE51
_RS04225
ABIE51
_RS04230
ABIE51
_RS04235
ABIE51
_RS04240
ABIE51
_RS04245
carbon source
Ying_all64 rep A; time point 2
-0.1
N.D.
N.D.
N.D.
-4.1
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
N.D.
N.D.
N.D.
-4.1
carbon source
Ying_AminoAcid20 rep C; time point 2
-0.1
N.D.
N.D.
N.D.
-4.1
carbon source
Ying_AminoAcid20 rep B; time point 2
-0.2
N.D.
N.D.
N.D.
-4.0
carbon source
Ying_all64 rep B; time point 2
-0.0
N.D.
N.D.
N.D.
-4.0
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.2
N.D.
N.D.
N.D.
-3.8
carbon source
Ying_all64 rep C; time point 2
-0.0
N.D.
N.D.
N.D.
-3.9
carbon source
Ying_all64 rep A; time point 1
-0.0
N.D.
N.D.
N.D.
-3.7
carbon source
Ying_all64 rep C; time point 1
+0.0
N.D.
N.D.
N.D.
-3.8
carbon source
Ying_all64 rep B; time point 1
-0.0
N.D.
N.D.
N.D.
-3.7
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.0
N.D.
N.D.
N.D.
-3.7
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.1
N.D.
N.D.
N.D.
-3.5
carbon source
Ying_sugar7 rep A; time point 2
-0.0
N.D.
N.D.
N.D.
-3.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
N.D.
N.D.
N.D.
-3.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.4
N.D.
N.D.
N.D.
-2.7
carbon source
Ying_sugar7 rep B; time point 2
+0.1
N.D.
N.D.
N.D.
-3.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.1
N.D.
N.D.
N.D.
-3.1
carbon source
casaminos (C)
+0.0
N.D.
N.D.
N.D.
-3.0
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.4
N.D.
N.D.
N.D.
-2.6
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.2
N.D.
N.D.
N.D.
-2.7
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
N.D.
N.D.
N.D.
-2.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
N.D.
N.D.
N.D.
-2.8
carbon source
Ying_sugar7 rep A; time point 3
-0.2
N.D.
N.D.
N.D.
-2.6
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.1
N.D.
N.D.
N.D.
-2.7
stress
R2A with 3-octanone 1.77016666666667 mM
-0.1
N.D.
N.D.
N.D.
-2.7
carbon source
Ying_all64 rep C; time point 3
-0.2
N.D.
N.D.
N.D.
-2.6
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.1
N.D.
N.D.
N.D.
-2.8
stress
R2A with 3-octanone 5.31033333333333 mM
-0.1
N.D.
N.D.
N.D.
-2.6
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.0
N.D.
N.D.
N.D.
-2.7
stress
R2A with 1-octen-3-ol 1.3568235 mM
-0.1
N.D.
N.D.
N.D.
-2.6
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