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Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS04135 and ABIE51_RS04140 overlap by 4 nucleotides
ABIE51_RS04140 and ABIE51_RS04145 are separated by 242 nucleotides
ABIE51_RS04145 and ABIE51_RS04150 are separated by 148 nucleotides
ABIE51_RS04150 and ABIE51_RS04155 are separated by 179 nucleotides
ABIE51_RS04135: ABIE51_RS04135 - ribulose-phosphate 3-epimerase, at 896,761 to 897,435
_RS04135
ABIE51_RS04140: ABIE51_RS04140 - ribonuclease E activity regulator RraA, at 897,432 to 897,905
_RS04140
ABIE51_RS04145: ABIE51_RS04145 - lipid kinase YegS, at 898,148 to 899,095
_RS04145
ABIE51_RS04150: ABIE51_RS04150 - anthranilate synthase component I, at 899,244 to 900,731
_RS04150
ABIE51_RS04155: ABIE51_RS04155 - hypothetical protein, at 900,911 to 901,612
_RS04155
Group
Condition
ABIE51
_RS04135
ABIE51
_RS04140
ABIE51
_RS04145
ABIE51
_RS04150
ABIE51
_RS04155
carbon source
Ying_sugar7 rep C; time point 3
N.D.
N.D.
-0.1
-6.0
-0.2
carbon source
Ying_sugar7 rep B; time point 3
N.D.
N.D.
+0.0
-5.9
-0.2
carbon source
Ying_sugar7 rep A; time point 3
N.D.
N.D.
+0.1
-6.1
-0.1
carbon source
Ying_sugar7 rep A; time point 2
N.D.
N.D.
+0.1
-5.9
+0.0
carbon source
Ying_sugar7 rep B; time point 2
N.D.
N.D.
+0.1
-5.9
+0.0
carbon source
Ying_sugar7 rep C; time point 2
N.D.
N.D.
+0.2
-5.7
+0.2
carbon source
casaminos (C)
N.D.
N.D.
+0.2
-4.8
+0.2
carbon source
casaminos (C)
N.D.
N.D.
+0.2
-4.6
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
N.D.
N.D.
+0.2
-4.0
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
N.D.
N.D.
+0.2
-3.8
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 2
N.D.
N.D.
+0.2
-3.7
+0.0
carbon source
Ying_sugar7 rep C; time point 1
N.D.
N.D.
+0.1
-3.3
+0.1
carbon source
Ying_sugar7 rep A; time point 1
N.D.
N.D.
+0.2
-3.2
-0.1
carbon source
D-Galactose (C)
N.D.
N.D.
+0.1
-3.3
+0.4
carbon source
D-Galactose (C)
N.D.
N.D.
+0.1
-2.3
+0.3
carbon source
Ying_OrganicAcid7 rep C; time point 1
N.D.
N.D.
-0.0
-1.8
-0.0
carbon source
D-Glucose-6-Phosphate (C)
N.D.
N.D.
+0.0
-2.0
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
-0.0
-1.7
-0.0
carbon source
D-Glucose-6-Phosphate (C)
N.D.
N.D.
+0.2
-1.9
+0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
+0.1
-1.6
-0.1
carbon source
acetate (C)
N.D.
N.D.
-0.0
-1.6
+0.0
carbon source
D-Maltose (C)
N.D.
N.D.
+0.0
-1.8
+0.3
carbon source
pyruvate (C)
N.D.
N.D.
+0.2
-1.6
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
-0.0
-1.2
-0.3
carbon source
D-Maltose (C)
N.D.
N.D.
+0.1
-1.5
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 1
N.D.
N.D.
+0.2
-1.5
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
+0.1
-1.4
+0.2
carbon source
Ying_OrganicAcid7 rep B; time point 1
N.D.
N.D.
+0.2
-1.0
+0.3
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
N.D.
+0.2
+0.9
+0.3
carbon source
Ying_AminoAcid20 rep A; time point 2
N.D.
N.D.
+0.3
+0.9
+0.4
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