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Cofit
Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS03910 and ABIE51_RS03915 are separated by 65 nucleotides
ABIE51_RS03915 and ABIE51_RS03920 are separated by 79 nucleotides
ABIE51_RS03920 and ABIE51_RS03925 are separated by 38 nucleotides
ABIE51_RS03925 and ABIE51_RS03930 overlap by 4 nucleotides
ABIE51_RS03910: ABIE51_RS03910 - hypothetical protein, at 856,784 to 857,284
_RS03910
ABIE51_RS03915: ABIE51_RS03915 - hypothetical protein, at 857,350 to 858,066
_RS03915
ABIE51_RS03920: ABIE51_RS03920 - GNAT family N-acetyltransferase, at 858,146 to 858,631
_RS03920
ABIE51_RS03925: ABIE51_RS03925 - tRNA dihydrouridine(20/20a) synthase DusA, at 858,670 to 859,680
_RS03925
ABIE51_RS03930: ABIE51_RS03930 - arginine deiminase-related protein, at 859,677 to 860,588
_RS03930
Group
Condition
ABIE51
_RS03910
ABIE51
_RS03915
ABIE51
_RS03920
ABIE51
_RS03925
ABIE51
_RS03930
carbon source
L-Asparagine (C)
+0.0
-0.3
-0.2
-0.0
-0.2
carbon source
L-Glutamine (C)
-0.1
-0.1
-0.4
-0.0
-0.1
carbon source
D-Glucose-6-Phosphate (C)
-0.0
+0.1
-0.2
-0.2
-0.1
carbon source
pyruvate (C)
+0.1
-0.1
-0.3
-0.1
-0.1
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.0
-0.2
-0.3
+0.1
-0.0
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
+0.1
-0.2
-0.2
-0.1
carbon source
Fumarate (C)
+0.1
+0.1
-0.3
-0.2
-0.2
carbon source
Fumarate (C)
+0.1
+0.1
-0.4
-0.2
-0.0
carbon source
Ying_all64 rep B; time point 3
-0.0
-0.1
-0.2
+0.2
-0.2
carbon source
L-Malic (C)
-0.1
+0.2
-0.2
-0.2
-0.1
carbon source
D-Galactose (C)
+0.1
+0.1
-0.2
-0.2
-0.0
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.0
-0.4
+0.0
+0.3
-0.3
carbon source
propionate (C)
+0.1
+0.2
-0.4
-0.0
-0.1
carbon source
2-Deoxy-D-Ribose (C)
+0.1
+0.1
-0.2
-0.0
-0.2
carbon source
Ying_all64 rep C; time point 3
+0.0
-0.2
+0.1
+0.2
-0.2
carbon source
Ying_sugar7 rep A; time point 2
-0.0
-0.5
+0.0
+0.4
+0.0
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
-0.4
+0.2
+0.5
-0.5
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.1
-0.3
+0.1
+0.3
-0.1
carbon source
Ying_sugar7 rep C; time point 1
-0.0
-0.3
+0.1
+0.4
+0.0
carbon source
Ying_sugar7 rep A; time point 1
+0.0
-0.4
+0.1
+0.4
+0.0
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
-0.3
+0.3
+0.6
-0.6
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.2
-0.0
+0.5
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.0
-0.2
+0.1
+0.3
-0.1
carbon source
Ying_sugar7 rep C; time point 3
-0.0
-0.2
+0.1
+0.5
-0.1
carbon source
Ying_sugar7 rep B; time point 3
-0.0
-0.3
+0.0
+0.6
+0.0
carbon source
Ying_sugar7 rep B; time point 2
+0.0
-0.2
+0.1
+0.4
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.1
-0.1
+0.2
+0.3
+0.0
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.2
-0.2
+0.4
+0.8
-0.6
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.1
+0.0
+0.2
+0.4
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.1
+0.1
+0.2
+0.3
+0.1
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ABIE51_RS03920
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