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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS03800 and ABIE51_RS03805 are separated by 315 nucleotides
ABIE51_RS03805 and ABIE51_RS03810 are separated by 9 nucleotides
ABIE51_RS03810 and ABIE51_RS03815 overlap by 11 nucleotides
ABIE51_RS03815 and ABIE51_RS03820 overlap by 4 nucleotides
ABIE51_RS03800: ABIE51_RS03800 - hypothetical protein, at 838,852 to 839,127
_RS03800
ABIE51_RS03805: ABIE51_RS03805 - fumarate/nitrate reduction transcriptional regulator Fnr, at 839,443 to 840,207
_RS03805
ABIE51_RS03810: ABIE51_RS03810 - sulfite exporter TauE/SafE family protein, at 840,217 to 840,960
_RS03810
ABIE51_RS03815: ABIE51_RS03815 - cbb3-type cytochrome oxidase assembly protein CcoS, at 840,950 to 841,150
_RS03815
ABIE51_RS03820: ABIE51_RS03820 - heavy metal translocating P-type ATPase, at 841,147 to 843,552
_RS03820
Group
Condition
ABIE51
_RS03800
ABIE51
_RS03805
ABIE51
_RS03810
ABIE51
_RS03815
ABIE51
_RS03820
carbon source
Glucuronamide (C)
+0.4
-1.5
-0.2
-1.2
-0.4
carbon source
Ying_AminoAcid20 rep B; time point 1
-0.0
-0.9
-0.3
-1.3
-0.3
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.2
-0.9
-0.4
-1.4
-0.2
carbon source
L-tyrosine (C)
-0.4
-0.5
+0.1
-1.8
-0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.1
-0.8
-0.1
-1.2
-0.6
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.1
-0.9
-0.2
-1.0
-0.5
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.1
-0.8
-0.3
-1.0
-0.4
carbon source
Ying_all64 rep C; time point 2
-0.2
-0.7
-0.2
-0.7
-0.5
carbon source
Ying_AminoAcid20 rep A; time point 1
-0.2
-0.7
-0.2
-0.9
-0.3
carbon source
Ying_sugar7 rep B; time point 2
+0.1
-0.9
-0.2
-0.6
-0.3
carbon source
Ying_all64 rep A; time point 1
+0.1
-1.0
-0.4
-0.4
-0.4
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.1
-0.8
-0.4
-0.3
-0.4
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.0
-0.9
-0.4
-0.5
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 1
-0.1
-0.6
-0.1
-0.7
-0.5
carbon source
Ying_sugar7 rep C; time point 3
+0.2
-0.8
-0.4
-0.5
-0.4
carbon source
Ying_sugar7 rep B; time point 3
+0.3
-1.0
-0.3
-0.7
-0.0
carbon source
Ying_sugar7 rep A; time point 3
+0.2
-0.7
-0.3
-0.7
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.2
-0.8
-0.2
-0.4
-0.3
carbon source
D-Glucuronic Acid (C)
-0.9
-0.7
-0.2
+0.7
-0.4
carbon source
propionate (C)
-0.6
-0.4
+0.5
-1.0
+0.0
carbon source
Ying_all64 rep C; time point 3
+0.3
-0.8
+0.1
-0.5
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
-0.3
+0.5
-1.1
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.4
+0.2
+0.0
-1.1
+0.3
carbon source
D-Maltose (C)
-0.6
+0.2
+0.6
-0.8
+0.4
carbon source
Fumarate (C)
+0.7
+0.3
+0.3
-0.7
+0.1
carbon source
D-Cellobiose (C)
-1.0
+0.6
+0.2
+1.2
+0.2
carbon source
L-Asparagine (C)
+0.3
-0.3
+0.3
+1.1
+0.2
carbon source
succinate (C)
-0.2
+0.3
+0.7
+1.0
-0.1
carbon source
D-Galactose (C)
-0.2
+0.2
+0.7
+0.9
+0.2
carbon source
D-Galactose (C)
+0.2
+0.7
+0.2
+1.3
+0.1
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