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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS03730 and ABIE51_RS03735 are separated by 127 nucleotides
ABIE51_RS03735 and ABIE51_RS03740 are separated by 412 nucleotides
ABIE51_RS03740 and ABIE51_RS03745 are separated by 163 nucleotides
ABIE51_RS03745 and ABIE51_RS03750 are separated by 6 nucleotides
ABIE51_RS03730: ABIE51_RS03730 - hypothetical protein, at 827,530 to 828,018
_RS03730
ABIE51_RS03735: ABIE51_RS03735 - dodecin, at 828,146 to 828,355
_RS03735
ABIE51_RS03740: ABIE51_RS03740 - response regulator transcription factor, at 828,768 to 829,538
_RS03740
ABIE51_RS03745: ABIE51_RS03745 - VOC family protein, at 829,702 to 830,082
_RS03745
ABIE51_RS03750: ABIE51_RS03750 - ligase-associated DNA damage response exonuclease, at 830,089 to 831,087
_RS03750
Group
Condition
ABIE51
_RS03730
ABIE51
_RS03735
ABIE51
_RS03740
ABIE51
_RS03745
ABIE51
_RS03750
carbon source
Ying_all64 rep B; time point 3
-0.5
N.D.
-1.0
+0.1
-0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.0
N.D.
-0.4
-0.5
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
N.D.
-1.0
+0.1
-0.3
carbon source
Ying_sugar7 rep A; time point 1
+0.2
N.D.
-0.3
-0.9
+0.0
carbon source
Ying_all64 rep A; time point 3
+0.1
N.D.
-0.9
-0.0
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
N.D.
-1.0
+0.1
+0.1
carbon source
succinate (C)
-0.1
N.D.
+0.1
-0.9
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.0
N.D.
-1.0
+0.3
-0.0
carbon source
D-Galactose (C)
-0.4
N.D.
-0.5
+0.0
+0.4
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.1
N.D.
-0.2
-0.5
+0.3
carbon source
L-Asparagine (C)
+0.1
N.D.
+0.0
-0.9
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.2
N.D.
-0.1
-0.7
+0.1
carbon source
L-Malic (C)
-0.3
N.D.
-0.2
+0.7
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.4
N.D.
-0.1
-0.4
+0.2
carbon source
L-tyrosine (C)
+0.5
N.D.
+0.2
-0.5
-0.1
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.3
N.D.
-0.3
+0.5
-0.4
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
N.D.
-0.5
+0.4
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.4
N.D.
-0.2
-0.4
+0.5
carbon source
D-Glucose-6-Phosphate (C)
+0.4
N.D.
-0.3
+0.3
+0.1
carbon source
L-Glutamine (C)
+0.8
N.D.
-0.0
-0.2
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.3
N.D.
-0.4
+0.5
+0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
N.D.
+0.9
-0.3
+0.1
carbon source
Glucuronamide (C)
+0.7
N.D.
-0.0
+0.4
-0.3
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
N.D.
+0.9
-0.0
+0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.2
N.D.
+0.2
+0.5
-0.1
carbon source
acetate (C)
+0.4
N.D.
-0.1
+0.3
+0.4
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.0
N.D.
+0.8
+0.3
-0.0
carbon source
acetate (C)
+0.1
N.D.
+0.2
+0.3
+0.5
carbon source
Ying_Others16 rep B; time point 1
+0.5
N.D.
+0.0
+0.4
+0.3
carbon source
Fumarate (C)
+0.7
N.D.
-0.0
+0.4
+0.4
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