Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS03220 and ABIE51_RS03225 are separated by 152 nucleotidesABIE51_RS03225 and ABIE51_RS03230 are separated by 61 nucleotidesABIE51_RS03230 and ABIE51_RS03235 are separated by 797 nucleotidesABIE51_RS03235 and ABIE51_RS03240 overlap by 4 nucleotides ABIE51_RS03220: ABIE51_RS03220 - FtsX-like permease family protein, at 712,877 to 714,034 _RS03220 ABIE51_RS03225: ABIE51_RS03225 - ABC transporter ATP-binding protein, at 714,187 to 714,882 _RS03225 ABIE51_RS03230: ABIE51_RS03230 - efflux RND transporter periplasmic adaptor subunit, at 714,944 to 716,197 _RS03230 ABIE51_RS03235: ABIE51_RS03235 - leucyl aminopeptidase family protein, at 716,995 to 718,374 _RS03235 ABIE51_RS03240: ABIE51_RS03240 - HAD-IA family hydrolase, at 718,371 to 719,087 _RS03240
Group Condition ABIE51_RS03220 ABIE51_RS03225 ABIE51_RS03230 ABIE51_RS03235 ABIE51_RS03240
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.2 -0.5 +0.1 -0.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.0 +0.1 -0.4 -0.6 -0.1
carbon source Ying_sugar7 rep A; time point 2 -0.2 -0.3 -0.1 -0.3 -0.1
carbon source Ying_sugar7 rep B; time point 3 -0.3 -0.2 +0.0 -0.5 -0.0
carbon source Ying_sugar7 rep B; time point 2 -0.2 -0.2 -0.3 -0.3 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.0 -0.2 -0.1 -0.5 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 1 -0.1 +0.1 -0.3 -0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.1 -0.1 -0.4 -0.3 +0.1
carbon source Ying_sugar7 rep A; time point 3 -0.3 -0.1 -0.1 -0.4 +0.2
carbon source Ying_sugar7 rep C; time point 3 -0.3 -0.0 +0.1 -0.5 +0.1
carbon source D-Galactose (C) -0.1 -0.3 +0.2 -0.0 -0.4
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.1 -0.1 +0.1 -0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media +0.2 -0.2 -0.2 -0.3 +0.0
carbon source Ying_all64 rep B; time point 3 -0.3 -0.1 +0.3 -0.2 -0.0
carbon source D-Maltose (C) +0.1 +0.5 -0.4 -0.4 -0.1
carbon source Ying_AminoAcid20 rep B; time point 1 -0.2 -0.3 -0.1 +0.3 +0.0
stress R2A with 3-octanone 5.31033333333333 mM +0.1 -0.2 +0.1 -0.4 +0.1
dmso control DMSO control +0.1 +0.2 +0.2 -0.4 -0.1
r2a no stress control R2A no stress control -0.1 +0.4 +0.1 -0.3 -0.1
carbon source L-Glutamine (C) -0.2 +0.2 +0.3 -0.1 -0.1
carbon source D-Cellobiose (C) -0.1 +0.7 -0.0 +0.1 -0.3
carbon source pyruvate (C) +0.1 +0.6 -0.1 -0.0 -0.1
stress R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM +0.1 +0.3 +0.3 -0.2 -0.1
carbon source succinate (C) +0.2 +0.5 +0.0 -0.2 -0.2
carbon source Ying_AminoAcid20 rep C; time point 3 -0.3 +0.4 +0.1 +0.1 +0.1
carbon source D-Glucuronic Acid (C) +0.1 +0.3 +0.3 -0.2 +0.2
carbon source L-Asparagine (C) +0.1 +0.4 +0.3 -0.2 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.4 +0.3 +0.1 -0.0
carbon source L-Malic (C) +0.1 +0.5 +0.4 -0.2 +0.1
carbon source propionate (C) +0.1 +0.5 +0.2 +0.2 -0.0
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