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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS03160 and ABIE51_RS03165 are separated by 58 nucleotides
ABIE51_RS03165 and ABIE51_RS03170 are separated by 106 nucleotides
ABIE51_RS03170 and ABIE51_RS03175 overlap by 4 nucleotides
ABIE51_RS03175 and ABIE51_RS03180 are separated by 56 nucleotides
ABIE51_RS03160: ABIE51_RS03160 - septal ring lytic transglycosylase RlpA family protein, at 700,083 to 701,279
_RS03160
ABIE51_RS03165: ABIE51_RS03165 - D-alanyl-D-alanine carboxypeptidase family protein, at 701,338 to 702,552
_RS03165
ABIE51_RS03170: ABIE51_RS03170 - DUF493 family protein, at 702,659 to 702,937
_RS03170
ABIE51_RS03175: ABIE51_RS03175 - lipoyl(octanoyl) transferase LipB, at 702,934 to 703,614
_RS03175
ABIE51_RS03180: ABIE51_RS03180 - lipoyl synthase, at 703,671 to 704,684
_RS03180
Group
Condition
ABIE51
_RS03160
ABIE51
_RS03165
ABIE51
_RS03170
ABIE51
_RS03175
ABIE51
_RS03180
carbon source
Ying_AminoAcid20 rep C; time point 2
-4.6
-8.5
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 2
-4.6
-8.0
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
-4.4
-7.9
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
-3.5
-7.9
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-3.4
-7.8
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
-3.3
-7.7
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 2
-4.6
-5.9
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-3.6
-6.5
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
-4.5
-5.6
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
-4.2
-5.7
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-3.5
-6.4
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep C; time point 2
-4.4
-5.4
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 2
-4.6
-5.0
N.D.
N.D.
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 1
-4.1
-5.4
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 2
-4.4
-4.9
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 2
-4.4
-4.8
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 3
-3.4
-5.7
N.D.
N.D.
N.D.
carbon source
Ying_sugar7 rep B; time point 2
-4.5
-4.4
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 3
-3.5
-5.4
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep A; time point 3
-3.0
-5.4
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep B; time point 3
-2.7
-5.4
N.D.
N.D.
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
-4.3
-3.7
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-4.1
-3.8
N.D.
N.D.
N.D.
carbon source
Ying_all64 rep C; time point 1
-4.3
-3.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-4.3
-3.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-4.3
-3.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-4.2
-3.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-4.1
-3.6
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
-4.2
-3.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-4.0
-3.7
N.D.
N.D.
N.D.
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