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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS02695 and ABIE51_RS02700 are separated by 162 nucleotides
ABIE51_RS02700 and ABIE51_RS02705 are separated by 152 nucleotides
ABIE51_RS02705 and ABIE51_RS02710 are separated by 104 nucleotides
ABIE51_RS02710 and ABIE51_RS02715 are separated by 58 nucleotides
ABIE51_RS02695: ABIE51_RS02695 - hypothetical protein, at 594,366 to 594,494
_RS02695
ABIE51_RS02700: ABIE51_RS02700 - hypothetical protein, at 594,657 to 594,884
_RS02700
ABIE51_RS02705: ABIE51_RS02705 - hypothetical protein, at 595,037 to 595,417
_RS02705
ABIE51_RS02710: ABIE51_RS02710 - chemotaxis protein CheB, at 595,522 to 596,505
_RS02710
ABIE51_RS02715: ABIE51_RS02715 - chemotaxis protein CheB, at 596,564 to 600,538
_RS02715
Group
Condition
ABIE51
_RS02695
ABIE51
_RS02700
ABIE51
_RS02705
ABIE51
_RS02710
ABIE51
_RS02715
carbon source
Fumarate (C)
-0.7
-0.0
-0.5
+0.0
-0.3
carbon source
Glucuronamide (C)
-0.7
+0.6
-1.0
-0.3
-0.1
carbon source
L-Glutamine (C)
-0.6
-0.0
-0.5
-0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.4
-0.4
-0.4
-0.0
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
-0.8
-0.3
-0.2
+0.1
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.5
-0.4
-0.2
-0.1
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
-0.2
-0.5
+0.0
+0.1
carbon source
L-Asparagine (C)
-0.6
-0.0
+0.2
-0.1
-0.3
carbon source
pyruvate (C)
-0.8
+0.0
+0.1
+0.1
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.6
+0.3
-0.4
+0.0
-0.0
carbon source
D-Cellobiose (C)
-1.0
-0.2
+0.2
+0.2
+0.2
carbon source
Ying_sugar7 rep B; time point 2
-0.8
+0.1
+0.1
-0.2
+0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
-0.4
+0.1
-0.6
+0.2
+0.1
carbon source
Ying_Others16 rep B; time point 1
-0.3
-0.5
+0.2
-0.2
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.3
-0.6
-0.3
-0.1
+0.0
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.3
-0.1
-0.8
+0.1
+0.0
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
-0.3
-0.1
-0.4
+0.2
+0.2
carbon source
L-tyrosine (C)
-0.3
+0.4
+0.2
-0.5
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.2
-0.3
+0.5
-0.2
-0.0
carbon source
succinate (C)
-0.1
+0.4
-0.4
+0.2
-0.2
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.4
-0.3
-0.3
-0.1
+0.2
carbon source
D-Galactose (C)
+0.5
-0.2
+0.0
-0.2
-0.3
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.5
+0.2
-0.4
+0.1
-0.1
carbon source
L-Malic (C)
+0.5
+0.3
-0.4
-0.0
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.6
-0.2
+0.2
-0.1
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.4
+0.3
-0.4
+0.1
+0.1
carbon source
D-Glucuronic Acid (C)
-0.1
+0.7
+0.2
-0.1
-0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.6
-0.3
+0.3
-0.0
-0.1
carbon source
D-Maltose (C)
+0.4
+0.5
-0.2
-0.3
+0.1
carbon source
propionate (C)
-0.1
+0.5
+0.3
-0.3
+0.1
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