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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS02540 and ABIE51_RS02545 overlap by 4 nucleotides
ABIE51_RS02545 and ABIE51_RS02550 are separated by 92 nucleotides
ABIE51_RS02550 and ABIE51_RS02555 are separated by 17 nucleotides
ABIE51_RS02555 and ABIE51_RS02560 are separated by 331 nucleotides
ABIE51_RS02540: ABIE51_RS02540 - hypothetical protein, at 561,557 to 562,339
_RS02540
ABIE51_RS02545: ABIE51_RS02545 - response regulator transcription factor, at 562,336 to 562,989
_RS02545
ABIE51_RS02550: ABIE51_RS02550 - MASE1 domain-containing protein, at 563,082 to 564,665
_RS02550
ABIE51_RS02555: ABIE51_RS02555 - tryptophan-rich sensory protein, at 564,683 to 565,441
_RS02555
ABIE51_RS02560: ABIE51_RS02560 - PAS domain-containing protein, at 565,773 to 567,320
_RS02560
Group
Condition
ABIE51
_RS02540
ABIE51
_RS02545
ABIE51
_RS02550
ABIE51
_RS02555
ABIE51
_RS02560
carbon source
L-Malic (C)
-0.1
-0.1
+0.1
-0.6
-0.9
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.4
+0.0
-0.1
-0.3
-0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
-0.0
+0.1
-0.1
-0.4
-0.2
carbon source
Ying_all64 rep B; time point 3
-0.1
-0.2
+0.5
-0.3
-0.4
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.1
+0.1
-0.2
-0.2
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.3
-0.1
-0.2
-0.4
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-0.1
+0.2
-0.3
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.1
+0.2
-0.2
+0.1
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.0
+0.2
-0.1
-0.3
-0.3
carbon source
Ying_sugar7 rep A; time point 3
-0.1
-0.1
+0.2
-0.4
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.0
-0.1
+0.3
-0.2
-0.3
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.1
+0.2
-0.1
-0.2
-0.4
carbon source
Ying_all64 rep A; time point 3
+0.0
+0.1
+0.2
-0.3
-0.4
carbon source
Ying_sugar7 rep A; time point 2
+0.1
-0.2
+0.2
+0.1
-0.4
carbon source
2-Deoxy-D-Ribose (C)
+0.2
+0.1
-0.1
+0.1
-0.4
carbon source
L-Glutamine (C)
-0.0
+0.2
-0.2
+0.2
-0.2
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.2
+0.0
+0.0
+0.3
-0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
+0.2
-0.3
+0.2
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
+0.2
+0.1
-0.3
+0.3
-0.1
carbon source
L-Tryptophan (C)
+0.4
+0.1
-0.3
+0.1
-0.0
carbon source
acetate (C)
+0.2
+0.2
-0.2
+0.2
-0.0
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
-0.1
-0.0
+0.5
-0.2
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
-0.1
+0.3
-0.2
+0.1
+0.3
carbon source
L-Asparagine (C)
+0.2
-0.2
-0.2
+0.2
+0.4
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
+0.2
+0.1
-0.2
+0.3
+0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.2
+0.1
+0.1
+0.3
+0.2
carbon source
L-tyrosine (C)
+0.6
-0.1
-0.1
+0.2
+0.2
stress
R2A with 3-octanone 5.31033333333333 mM
+0.3
+0.1
-0.1
+0.4
+0.2
carbon source
Ying_Others16 rep C; time point 1
+0.1
+0.0
+0.3
+0.4
+0.0
carbon source
succinate (C)
+0.2
+0.2
+0.0
+0.3
+0.5
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