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Cofit
Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS02355 and ABIE51_RS02360 are separated by 111 nucleotides
ABIE51_RS02360 and ABIE51_RS02365 are separated by 341 nucleotides
ABIE51_RS02365 and ABIE51_RS02370 are separated by 237 nucleotides
ABIE51_RS02370 and ABIE51_RS02375 are separated by 375 nucleotides
ABIE51_RS02355: ABIE51_RS02355 - hypothetical protein, at 528,667 to 529,134
_RS02355
ABIE51_RS02360: ABIE51_RS02360 - hypothetical protein, at 529,246 to 530,103
_RS02360
ABIE51_RS02365: ABIE51_RS02365 - hypothetical protein, at 530,445 to 531,023
_RS02365
ABIE51_RS02370: ABIE51_RS02370 - hypothetical protein, at 531,261 to 531,614
_RS02370
ABIE51_RS02375: ABIE51_RS02375 - hypothetical protein, at 531,990 to 532,514
_RS02375
Group
Condition
ABIE51
_RS02355
ABIE51
_RS02360
ABIE51
_RS02365
ABIE51
_RS02370
ABIE51
_RS02375
carbon source
Glucuronamide (C)
-0.0
+0.0
-0.3
-0.2
-0.3
carbon source
D-Cellobiose (C)
-0.1
-0.2
-0.0
-0.3
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.0
-0.2
-0.1
-0.2
-0.2
carbon source
L-Asparagine (C)
-0.1
+0.1
-0.0
-0.6
+0.0
carbon source
Ying_Others16 rep A; time point 1
-0.1
+0.1
-0.1
+0.0
-0.3
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.0
-0.2
+0.1
-0.3
+0.0
carbon source
succinate (C)
-0.1
-0.0
-0.2
+0.3
-0.3
carbon source
Ying_Others16 rep B; time point 1
+0.1
-0.2
-0.2
+0.2
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.1
-0.2
-0.1
+0.2
-0.0
stress
R2A with 3-octanone 5.31033333333333 mM
-0.1
+0.2
-0.0
-0.3
+0.2
carbon source
Ying_all64 rep C; time point 3
-0.1
-0.1
+0.1
+0.2
-0.2
stress
R2A with 3-octanone 2.65516666666667 mM
+0.1
+0.0
+0.2
-0.3
-0.0
stress
R2A with 3-octanone 1.77016666666667 mM
-0.1
+0.2
+0.1
-0.2
+0.1
carbon source
casaminos (C)
+0.2
-0.1
+0.1
+0.1
-0.3
carbon source
Ying_all64 rep B; time point 3
-0.1
-0.2
+0.2
+0.2
-0.1
carbon source
D-Galactose (C)
-0.1
-0.0
+0.2
+0.2
-0.2
carbon source
Fumarate (C)
+0.1
-0.0
-0.0
+0.4
-0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.2
-0.1
+0.1
+0.4
-0.1
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
+0.1
-0.1
-0.1
+0.3
-0.0
carbon source
propionate (C)
-0.1
-0.0
-0.1
+0.4
-0.1
carbon source
Ying_Others16 rep C; time point 1
+0.2
+0.0
-0.1
+0.3
-0.2
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
+0.0
-0.0
+0.2
+0.3
-0.2
dmso control
DMSO control
+0.1
-0.0
+0.0
+0.4
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.2
+0.1
+0.1
+0.3
+0.0
carbon source
D-Glucuronic Acid (C)
-0.1
-0.2
+0.1
+0.5
+0.1
carbon source
L-Malic (C)
-0.1
-0.3
+0.0
+0.5
+0.3
carbon source
D-Maltose (C)
-0.0
+0.1
+0.1
+0.3
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.2
+0.0
+0.1
+0.3
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.0
+0.1
+0.1
+0.4
-0.0
carbon source
D-Maltose (C)
+0.2
+0.0
+0.0
+0.4
-0.0
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ABIE51_RS02365
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