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Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS01065 and ABIE51_RS01070 overlap by 7 nucleotides
ABIE51_RS01070 and ABIE51_RS01075 are separated by 201 nucleotides
ABIE51_RS01075 and ABIE51_RS01080 are separated by 16 nucleotides
ABIE51_RS01080 and ABIE51_RS01085 are separated by 3 nucleotides
ABIE51_RS01065: ABIE51_RS01065 - SDR family oxidoreductase, at 228,991 to 229,740
_RS01065
ABIE51_RS01070: ABIE51_RS01070 - efflux transporter outer membrane subunit, at 229,734 to 231,221
_RS01070
ABIE51_RS01075: ABIE51_RS01075 - GTP cyclohydrolase I FolE, at 231,423 to 232,013
_RS01075
ABIE51_RS01080: ABIE51_RS01080 - DUF938 domain-containing protein, at 232,030 to 232,653
_RS01080
ABIE51_RS01085: ABIE51_RS01085 - HAD family hydrolase, at 232,657 to 233,250
_RS01085
Group
Condition
ABIE51
_RS01065
ABIE51
_RS01070
ABIE51
_RS01075
ABIE51
_RS01080
ABIE51
_RS01085
carbon source
succinate (C)
-0.1
-0.3
N.D.
-1.0
-0.4
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.4
-0.1
N.D.
-0.4
-0.4
carbon source
Ying_all64 rep B; time point 3
-0.4
-0.1
N.D.
-0.4
-0.4
carbon source
propionate (C)
-0.4
+0.1
N.D.
-0.6
-0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media
+0.1
-0.1
N.D.
-0.7
-0.4
carbon source
D-Glucuronic Acid (C)
+0.3
+0.1
N.D.
+0.2
-0.6
carbon source
D-Cellobiose (C)
+0.9
+0.2
N.D.
-0.3
-0.6
carbon source
Ying_Others16 rep B; time point 1
+0.4
-0.2
N.D.
+0.4
+0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.6
+0.5
N.D.
+0.2
-0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.6
+0.5
N.D.
+0.2
-0.2
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.6
+0.3
N.D.
+0.0
+0.4
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.8
+0.8
N.D.
+0.0
-0.4
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.5
+0.6
N.D.
+0.1
+0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.6
+0.6
N.D.
-0.0
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.6
+0.5
N.D.
+0.2
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.5
+0.6
N.D.
+0.2
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
+0.4
+0.3
N.D.
+0.4
+0.3
carbon source
Ying_Others16 rep A; time point 1
+0.2
+0.2
N.D.
+0.7
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.7
+0.5
N.D.
-0.2
+0.4
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.6
+0.6
N.D.
+0.0
+0.2
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.7
+0.5
N.D.
+0.2
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
+0.7
+0.6
N.D.
+0.2
-0.0
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.6
+0.6
N.D.
+0.2
+0.1
stress
R2A with 1-octen-3-ol 0.904549 mM
+0.7
+0.5
N.D.
+0.1
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.7
+0.7
N.D.
+0.2
-0.1
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
+0.7
+0.6
N.D.
+0.0
+0.3
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.8
+0.7
N.D.
+0.0
+0.2
stress
R2A with 1-octen-3-ol 1.3568235 mM
+0.7
+0.5
N.D.
+0.3
+0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
+0.9
+0.7
N.D.
+0.2
+0.3
stress
R2A with 2-pentyl-furan 32.0526 mM
+1.1
+0.9
N.D.
+0.2
+0.4
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