Fitness for 5 genes in Lysobacter sp. OAE881

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500 ntABIE51_RS00960 and ABIE51_RS00965 are separated by 351 nucleotidesABIE51_RS00965 and ABIE51_RS00970 overlap by 4 nucleotidesABIE51_RS00970 and ABIE51_RS00975 are separated by 86 nucleotidesABIE51_RS00975 and ABIE51_RS00980 are separated by 144 nucleotides ABIE51_RS00960: ABIE51_RS00960 - TIGR00266 family protein, at 199,785 to 200,807 _RS00960 ABIE51_RS00965: ABIE51_RS00965 - aspartate/glutamate racemase family protein, at 201,159 to 201,851 _RS00965 ABIE51_RS00970: ABIE51_RS00970 - M28 family metallopeptidase, at 201,848 to 203,518 _RS00970 ABIE51_RS00975: ABIE51_RS00975 - rhomboid family intramembrane serine protease, at 203,605 to 204,372 _RS00975 ABIE51_RS00980: ABIE51_RS00980 - class I SAM-dependent rRNA methyltransferase, at 204,517 to 205,686 _RS00980
Group Condition ABIE51_RS00960 ABIE51_RS00965 ABIE51_RS00970 ABIE51_RS00975 ABIE51_RS00980
carbon source Fumarate (C) -0.3 -0.2 -0.3 -0.0 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM -0.1 -0.2 -0.3 -0.1 -0.0
carbon source L-Malic (C) -0.4 -0.2 +0.0 -0.0 -0.1
carbon source Fumarate (C) -0.3 -0.3 +0.1 +0.1 -0.1
carbon source acetate (C) -0.1 +0.1 +0.1 -0.3 -0.1
carbon source L-Asparagine (C) -0.2 -0.2 +0.1 -0.2 +0.1
carbon source Ying_all64 rep B; time point 1 -0.1 +0.2 -0.2 -0.2 -0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.4 +0.1 +0.1 +0.1 -0.2
carbon source L-Glutamine (C) -0.3 -0.1 +0.2 -0.1 +0.0
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.4 +0.3 +0.1 -0.1
stress R2A with 2-pentyl-furan 32.0526 mM +0.1 -0.0 +0.0 -0.5 +0.2
stress R2A with 2-pentyl-furan 32.0526 mM +0.1 -0.1 +0.1 -0.4 +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -0.2 +0.1 +0.1 -0.1 -0.1
carbon source L-tyrosine (C) +0.0 +0.2 +0.0 -0.4 +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 +0.1 +0.2 -0.2 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 +0.1 +0.1 -0.2 +0.1
carbon source succinate (C) -0.1 -0.3 +0.2 +0.1 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 +0.2 +0.2 -0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 +0.2 +0.3 -0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.2 +0.3 +0.1 -0.1 +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 +0.3 +0.0 -0.1 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -0.2 +0.4 +0.1 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.0 +0.3 +0.2 -0.3 +0.2
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus -0.1 +0.1 +0.3 -0.1 +0.2
carbon source propionate (C) -0.2 +0.2 +0.2 -0.0 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media -0.2 +0.3 +0.1 +0.1 +0.1
stress R2A with 3-octanone 5.31033333333333 mM +0.3 +0.1 -0.1 -0.0 +0.2
carbon source Glucuronamide (C) -0.2 +0.2 +0.1 +0.3 +0.1
stress R2A with 1-octen-3-ol 1.08545883333333 mM -0.0 +0.3 -0.2 +0.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.0 +0.3 +0.2 -0.0 +0.2
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