Fitness for 5 genes in Lysobacter sp. OAE881

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntABIE51_RS00895 and ABIE51_RS00900 are separated by 134 nucleotidesABIE51_RS00900 and ABIE51_RS00905 are separated by 2 nucleotidesABIE51_RS00905 and ABIE51_RS00910 overlap by 4 nucleotidesABIE51_RS00910 and ABIE51_RS00915 are separated by 23 nucleotides ABIE51_RS00895: ABIE51_RS00895 - acetyl-CoA hydrolase/transferase family protein, at 187,297 to 188,808 _RS00895 ABIE51_RS00900: ABIE51_RS00900 - fluoride efflux transporter CrcB, at 188,943 to 189,323 _RS00900 ABIE51_RS00905: ABIE51_RS00905 - response regulator transcription factor, at 189,326 to 189,958 _RS00905 ABIE51_RS00910: ABIE51_RS00910 - histidine kinase, at 189,955 to 191,185 _RS00910 ABIE51_RS00915: ABIE51_RS00915 - hypothetical protein, at 191,209 to 191,925 _RS00915
Group Condition ABIE51_RS00895 ABIE51_RS00900 ABIE51_RS00905 ABIE51_RS00910 ABIE51_RS00915
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media +0.0 -0.3 +0.1 -0.5 -0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.1 -0.4 -0.1 -0.3 -0.1
carbon source D-Maltose (C) +0.1 -0.7 -0.2 -0.1 +0.1
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.0 -0.4 -0.1 -0.2 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A_HEPES media -0.1 -0.3 +0.2 -0.5 -0.0
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.1 -0.3 +0.1 -0.2 -0.1
carbon source D-Galactose (C) -0.1 +0.1 -0.3 -0.3 -0.1
carbon source Ying_all64 rep B; time point 2 +0.0 -0.2 -0.1 -0.3 +0.0
carbon source Ying_AminoAcid20 rep C; time point 2 +0.1 -0.4 -0.1 -0.2 +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.3 -0.1 -0.2 +0.0
carbon source Ying_Nucleobase14 rep C; time point 1 +0.0 -0.4 +0.1 -0.2 -0.0
carbon source Ying_sugar7 rep B; time point 2 +0.1 -0.5 -0.0 -0.1 +0.0
stress R2A with 1-octen-3-ol 1.08545883333333 mM +0.1 -0.1 -0.2 -0.2 +0.1
carbon source Ying_all64 rep B; time point 1 +0.1 -0.5 -0.2 +0.1 +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 -0.3 +0.1 -0.3 -0.0
carbon source Ying_all64 rep B; time point 3 +0.1 -0.4 -0.2 +0.1 +0.1
carbon source succinate (C) +0.1 +0.2 +0.0 -0.3 -0.2
carbon source acetate (C) -0.5 +0.5 +0.1 -0.0 -0.0
carbon source D-Maltose (C) -0.0 +0.6 -0.2 -0.1 -0.1
carbon source Fumarate (C) -0.0 +0.5 +0.1 -0.1 -0.3
agar plate interaction control Parafilmed volatile R2A agar plate with no fungus -0.1 +0.4 +0.1 -0.2 -0.0
carbon source D-Glucuronic Acid (C) -0.1 +0.4 -0.3 +0.1 +0.0
agar plate interaction control Parafilmed volatile R2A_HEPES agar plate with no fungus +0.0 -0.3 +0.1 +0.3 +0.1
carbon source L-Tryptophan (C) +0.1 +0.5 +0.1 -0.2 -0.2
carbon source Fumarate (C) +0.1 +0.4 -0.1 -0.1 +0.0
carbon source D-Cellobiose (C) +0.2 +0.4 +0.2 -0.1 -0.2
carbon source D-Glucose-6-Phosphate (C) +0.1 +0.6 -0.1 -0.0 +0.0
carbon source Glucuronamide (C) +0.1 +1.0 -0.1 -0.1 -0.2
carbon source pyruvate (C) +0.1 +0.6 +0.1 -0.2 +0.0
carbon source L-Malic (C) +0.1 +0.8 +0.2 -0.1 -0.1
remove
ABIE51_RS00895
plot
remove
ABIE51_RS00900
plot
remove
ABIE51_RS00905
remove
ABIE51_RS00910
plot
remove
ABIE51_RS00915
plot