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Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS00790 and ABIE51_RS00795 are separated by 49 nucleotides
ABIE51_RS00795 and ABIE51_RS00800 are separated by 15 nucleotides
ABIE51_RS00800 and ABIE51_RS00805 are separated by 170 nucleotides
ABIE51_RS00805 and ABIE51_RS00810 are separated by 54 nucleotides
ABIE51_RS00790: ABIE51_RS00790 - MotA/TolQ/ExbB proton channel family protein, at 167,436 to 168,188
_RS00790
ABIE51_RS00795: ABIE51_RS00795 - biopolymer transporter ExbD, at 168,238 to 168,657
_RS00795
ABIE51_RS00800: ABIE51_RS00800 - biopolymer transporter ExbD, at 168,673 to 169,086
_RS00800
ABIE51_RS00805: ABIE51_RS00805 - biopolymer transporter ExbD, at 169,257 to 169,676
_RS00805
ABIE51_RS00810: ABIE51_RS00810 - pyridoxine 5'-phosphate synthase, at 169,731 to 170,501
_RS00810
Group
Condition
ABIE51
_RS00790
ABIE51
_RS00795
ABIE51
_RS00800
ABIE51
_RS00805
ABIE51
_RS00810
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
-4.2
-0.3
N.D.
stress
R2A with 2-pentyl-furan 10.6842 mM
N.D.
N.D.
-2.7
-0.3
N.D.
carbon source
pyruvate (C)
N.D.
N.D.
-2.8
-0.0
N.D.
stress
R2A with 3-octanone 5.31033333333333 mM
N.D.
N.D.
-2.8
+0.1
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
-2.3
-0.5
N.D.
r2a no stress control
R2A no stress control
N.D.
N.D.
-2.3
-0.3
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
-2.6
-0.0
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
N.D.
N.D.
-2.5
+0.0
N.D.
carbon source
Fumarate (C)
N.D.
N.D.
-2.5
+0.0
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
-2.4
+0.0
N.D.
stress
R2A with 1-octen-3-ol 0.904549 mM
N.D.
N.D.
-2.3
+0.1
N.D.
stress
R2A with 2-pentyl-furan 21.3684 mM
N.D.
N.D.
-1.9
-0.3
N.D.
agar plate interaction control
Parafilmed volatile R2A_HEPES agar plate with no fungus
N.D.
N.D.
-2.1
-0.1
N.D.
stress
R2A with 1-octen-3-ol 1.3568235 mM
N.D.
N.D.
-2.0
-0.1
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
N.D.
-2.0
-0.1
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
-2.0
-0.1
N.D.
stress
R2A with 2-pentyl-furan 32.0526 mM
N.D.
N.D.
-2.0
-0.1
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
-1.8
-0.2
N.D.
carbon source
acetate (C)
N.D.
N.D.
-2.1
+0.1
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
-1.9
-0.1
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.6266795 mM
N.D.
N.D.
-1.9
-0.0
N.D.
carbon source
propionate (C)
N.D.
N.D.
-2.0
+0.2
N.D.
stress
R2A with 1-octen-3-ol 1.08545883333333 mM
N.D.
N.D.
-1.9
+0.1
N.D.
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
N.D.
N.D.
-1.9
+0.2
N.D.
carbon source
D-Galactose (C)
N.D.
N.D.
-1.9
+0.3
N.D.
stress
R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
N.D.
N.D.
-1.8
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
N.D.
N.D.
+1.7
-0.3
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 3
N.D.
N.D.
+2.1
-0.0
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
N.D.
N.D.
+2.1
+0.0
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
N.D.
+2.1
+0.0
N.D.
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