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Protein
Homologs
Fitness for 5 genes in
Lysobacter sp. OAE881
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE51_RS00620 and ABIE51_RS00625 overlap by 4 nucleotides
ABIE51_RS00625 and ABIE51_RS00630 overlap by 4 nucleotides
ABIE51_RS00630 and ABIE51_RS00635 are separated by 232 nucleotides
ABIE51_RS00635 and ABIE51_RS00640 are separated by 91 nucleotides
ABIE51_RS00620: ABIE51_RS00620 - nicotinate phosphoribosyltransferase, at 128,386 to 129,810
_RS00620
ABIE51_RS00625: ABIE51_RS00625 - DMT family transporter, at 129,807 to 130,799
_RS00625
ABIE51_RS00630: ABIE51_RS00630 - aldo/keto reductase, at 130,796 to 131,749
_RS00630
ABIE51_RS00635: ABIE51_RS00635 - hybrid sensor histidine kinase/response regulator, at 131,982 to 133,091
_RS00635
ABIE51_RS00640: ABIE51_RS00640 - hypothetical protein, at 133,183 to 133,590
_RS00640
Group
Condition
ABIE51
_RS00620
ABIE51
_RS00625
ABIE51
_RS00630
ABIE51
_RS00635
ABIE51
_RS00640
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
+0.0
+0.3
-6.2
-0.2
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.1
+0.1
+0.3
-5.8
+0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.3
+0.1
+0.3
-5.2
-0.1
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.1
+0.1
+0.2
-5.2
-0.0
stress
R2A with 2-pentyl-furan 21.3684 mM
-0.2
+0.1
+0.3
-4.8
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.3
+0.1
+0.4
-4.6
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.4
+0.0
+0.4
-4.4
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.1
+0.1
-0.3
-3.6
-0.3
carbon source
Ying_all64 rep C; time point 2
+0.1
+0.1
-0.5
-3.4
-0.1
carbon source
Ying_sugar7 rep C; time point 1
+0.0
-0.0
-0.3
-3.3
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 2
-0.2
-0.0
-0.6
-3.0
+0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.1
+0.0
+0.2
-4.0
+0.2
carbon source
Ying_all64 rep B; time point 2
+0.1
+0.1
-0.5
-3.3
-0.0
carbon source
Ying_sugar7 rep B; time point 2
+0.1
+0.0
-0.2
-3.4
-0.2
carbon source
Ying_all64 rep A; time point 2
+0.1
-0.0
-0.5
-3.0
-0.1
stress
R2A with 2-pentyl-furan 32.0526 mM
-0.2
+0.1
+0.3
-3.7
+0.0
carbon source
Ying_all64 rep A; time point 1
-0.1
+0.0
-0.3
-3.0
-0.1
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.3
-0.0
+0.2
-3.4
+0.1
carbon source
Ying_all64 rep C; time point 1
+0.1
+0.0
-0.4
-3.0
-0.0
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.3
-0.0
+0.2
-3.2
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
+0.0
+0.0
-0.8
-2.4
-0.2
carbon source
Ying_sugar7 rep A; time point 1
-0.0
+0.2
-0.2
-2.9
-0.3
stress
R2A with 2-pentyl-furan 10.6842 mM
-0.2
+0.1
+0.2
-3.2
-0.1
carbon source
Ying_sugar7 rep A; time point 2
+0.2
+0.1
-0.3
-2.9
-0.2
carbon source
Ying_all64 rep B; time point 1
+0.2
+0.1
-0.4
-3.0
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.1
+0.1
-0.3
-2.7
-0.1
agar plate interaction control
Parafilmed volatile R2A agar plate with no fungus
-0.1
+0.0
-0.3
-2.3
-0.4
carbon source
Ying_OrganicAcid7 rep A; time point 2
-0.1
-0.0
-0.5
-2.5
+0.0
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.0
+0.1
-0.6
-2.3
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI; R2A media
-0.2
-0.0
-0.3
-2.5
+0.2
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