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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS14705 and ABCV34_RS14710 are separated by 193 nucleotides
ABCV34_RS14710 and ABCV34_RS14715 are separated by 47 nucleotides
ABCV34_RS14715 and ABCV34_RS14720 are separated by 309 nucleotides
ABCV34_RS14720 and ABCV34_RS14725 are separated by 22 nucleotides
ABCV34_RS14705: ABCV34_RS14705 - CopD family protein, at 3,120,605 to 3,122,311
_RS14705
ABCV34_RS14710: ABCV34_RS14710 - NUDIX hydrolase, at 3,122,505 to 3,123,086
_RS14710
ABCV34_RS14715: ABCV34_RS14715 - carbonic anhydrase, at 3,123,134 to 3,123,769
_RS14715
ABCV34_RS14720: ABCV34_RS14720 - ABC transporter substrate-binding protein, at 3,124,079 to 3,125,095
_RS14720
ABCV34_RS14725: ABCV34_RS14725 - ABC transporter ATP-binding protein, at 3,125,118 to 3,125,885
_RS14725
Group
Condition
ABCV34
_RS14705
ABCV34
_RS14710
ABCV34
_RS14715
ABCV34
_RS14720
ABCV34
_RS14725
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.0
-0.1
N.D.
-0.1
-0.3
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
+0.0
-0.2
N.D.
-0.1
-0.2
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.1
+0.1
N.D.
-0.2
-0.2
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.2
-0.1
N.D.
-0.1
-0.0
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.1
-0.2
N.D.
-0.1
-0.1
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.2
+0.2
N.D.
-0.2
-0.2
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
+0.1
-0.2
N.D.
-0.1
-0.1
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
+0.1
+0.1
N.D.
-0.1
-0.2
aerobic metal stress
Aerobic; Cobalt chloride 2
-0.1
+0.0
N.D.
+0.3
-0.3
aerobic no stress control
Aerobic no stress control
+0.2
-0.1
N.D.
-0.1
-0.1
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.2
N.D.
-0.2
+0.1
aerobic metal stress
Aerobic; Cobalt chloride 2
-0.0
-0.2
N.D.
+0.2
-0.1
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.2
+0.0
N.D.
-0.2
-0.1
aerobic metal stress
Aerobic; Cadmium acetate 1
+0.1
-0.2
N.D.
+0.2
-0.1
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.2
+0.0
N.D.
-0.0
-0.2
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
+0.1
+0.2
N.D.
-0.1
-0.2
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
+0.2
+0.0
N.D.
-0.1
-0.1
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
+0.2
+0.1
N.D.
-0.0
-0.2
aerobic metal stress
Aerobic; copper (II) chloride 1
-0.2
+0.2
N.D.
+0.0
+0.0
ph; anaerobic
Anaerobic, pH5.5
+0.0
+0.3
N.D.
-0.2
+0.0
ph; anaerobic
Anaerobic, pH5.5
+0.2
+0.1
N.D.
-0.2
-0.1
ph; anaerobic
Anaerobic, pH5.5
+0.2
+0.1
N.D.
-0.3
+0.1
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.2
+0.0
N.D.
-0.1
-0.1
ph; anaerobic
Anaerobic, pH5.5
+0.2
+0.1
N.D.
-0.2
-0.0
aerobic metal stress
Aerobic; Cobalt chloride 2
-0.1
+0.2
N.D.
+0.1
-0.1
aerobic metal stress
Aerobic; Nickel (II) chloride 20
-0.2
+0.3
N.D.
+0.1
+0.2
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.2
+0.2
N.D.
-0.0
+0.0
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.1
+0.1
N.D.
-0.1
+0.2
aerobic metal stress
Aerobic; Cobalt chloride 2
-0.0
+0.1
N.D.
+0.2
+0.1
anaerobic no stress control
Anaerobic no stress control
+0.1
+0.2
N.D.
+0.1
+0.1
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