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Protein
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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS14220 and ABCV34_RS14225 are separated by 112 nucleotides
ABCV34_RS14225 and ABCV34_RS14230 are separated by 215 nucleotides
ABCV34_RS14230 and ABCV34_RS14235 overlap by 4 nucleotides
ABCV34_RS14235 and ABCV34_RS14240 are separated by 72 nucleotides
ABCV34_RS14220: ABCV34_RS14220 - DUF4390 domain-containing protein, at 3,017,579 to 3,018,145
_RS14220
ABCV34_RS14225: ABCV34_RS14225 - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 3,018,258 to 3,019,544
_RS14225
ABCV34_RS14230: ABCV34_RS14230 - 30S ribosomal protein S12 methylthiotransferase RimO, at 3,019,760 to 3,021,082
_RS14230
ABCV34_RS14235: ABCV34_RS14235 - methyltransferase domain-containing protein, at 3,021,079 to 3,022,026
_RS14235
ABCV34_RS14240: ABCV34_RS14240 - phosphoribosyltransferase family protein, at 3,022,099 to 3,022,857
_RS14240
Group
Condition
ABCV34
_RS14220
ABCV34
_RS14225
ABCV34
_RS14230
ABCV34
_RS14235
ABCV34
_RS14240
aerobic no stress control
Aerobic no stress control
-1.6
+0.0
+0.0
N.D.
-0.1
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.8
-0.2
-0.6
N.D.
-0.1
aerobic metal stress
Aerobic; FW104 COMM 1 X
-1.5
-0.1
-0.0
N.D.
-0.0
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.8
+0.1
-0.9
N.D.
+0.0
aerobic no stress control
Aerobic no stress control
-1.6
-0.0
+0.1
N.D.
+0.1
aerobic metal stress
Aerobic; Nickel (II) chloride 20
-1.6
-0.1
-0.0
N.D.
+0.1
aerobic metal stress
Aerobic; Nickel (II) chloride 20
-1.5
+0.2
-0.1
N.D.
-0.0
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-1.0
+0.1
-0.7
N.D.
+0.1
aerobic metal stress
Aerobic; copper (II) chloride 1
-1.5
-0.1
+0.1
N.D.
+0.1
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.7
+0.1
-0.7
N.D.
-0.1
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.8
+0.2
-0.7
N.D.
-0.0
aerobic metal stress
Aerobic; FW104 COMM 1 X
-1.4
-0.0
-0.0
N.D.
+0.1
aerobic metal stress
Aerobic; Cobalt chloride 2
-1.2
+0.0
-0.2
N.D.
+0.1
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.9
+0.1
-0.6
N.D.
+0.1
aerobic metal stress
Aerobic; FW104 COMM 1 X
-1.4
+0.0
+0.1
N.D.
-0.0
aerobic metal stress
Aerobic; Cadmium acetate 1
-1.6
+0.1
+0.2
N.D.
-0.0
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.7
+0.1
-0.8
N.D.
+0.1
aerobic metal stress
Aerobic; copper (II) chloride 1
-1.4
-0.1
+0.1
N.D.
+0.1
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
-1.5
-0.0
+0.1
N.D.
+0.1
aerobic metal stress
Aerobic; Uranyl acetate 80
-1.5
+0.2
-0.0
N.D.
+0.1
aerobic metal stress
Aerobic; FW104 COMM 1 X
-1.3
+0.2
-0.1
N.D.
-0.1
aerobic metal stress
Aerobic; copper (II) chloride 1
-1.4
+0.1
+0.0
N.D.
+0.0
aerobic metal stress
Aerobic; Cobalt chloride 2
-1.2
-0.0
+0.1
N.D.
-0.1
ph; anaerobic
Anaerobic, pH7.5
-0.7
+0.2
-0.5
N.D.
-0.1
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
-1.3
+0.1
+0.2
N.D.
-0.1
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.6
+0.1
-0.7
N.D.
+0.0
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-0.6
+0.2
-0.7
N.D.
+0.1
aerobic metal stress
Aerobic; Aluminium sulfate 215
-1.2
+0.1
+0.1
N.D.
+0.1
ph; anaerobic
Anaerobic, pH5.5
+0.6
+0.0
-0.7
N.D.
-0.2
ph; anaerobic
Anaerobic, pH5.5
+0.7
+0.2
-0.6
N.D.
-0.1
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