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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS13975 and ABCV34_RS13980 are separated by 5 nucleotides
ABCV34_RS13980 and ABCV34_RS13985 are separated by 149 nucleotides
ABCV34_RS13985 and ABCV34_RS13990 overlap by 4 nucleotides
ABCV34_RS13990 and ABCV34_RS13995 are separated by 64 nucleotides
ABCV34_RS13975: ABCV34_RS13975 - TRAP transporter small permease, at 2,962,108 to 2,962,671
_RS13975
ABCV34_RS13980: ABCV34_RS13980 - TRAP transporter substrate-binding protein, at 2,962,677 to 2,963,672
_RS13980
ABCV34_RS13985: ABCV34_RS13985 - PAS domain S-box protein, at 2,963,822 to 2,965,825
_RS13985
ABCV34_RS13990: ABCV34_RS13990 - response regulator, at 2,965,822 to 2,966,430
_RS13990
ABCV34_RS13995: ABCV34_RS13995 - aldehyde dehydrogenase family protein, at 2,966,495 to 2,967,058
_RS13995
Group
Condition
ABCV34
_RS13975
ABCV34
_RS13980
ABCV34
_RS13985
ABCV34
_RS13990
ABCV34
_RS13995
ph; aerobic
Aerobic, pH5.5
-0.1
-0.1
+0.1
-0.4
-0.4
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.2
-0.2
-0.1
-0.2
-0.2
ph; anaerobic
Anaerobic, pH7.5
-0.1
-0.3
+0.0
-0.2
-0.3
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.2
-0.4
-0.0
-0.2
-0.0
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-0.1
-0.2
-0.1
-0.2
-0.2
ph; aerobic
Aerobic, pH5.5
-0.2
-0.1
-0.1
-0.2
-0.1
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.1
-0.2
-0.1
-0.2
-0.2
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.1
-0.3
-0.1
-0.2
-0.1
ph; anaerobic
Anaerobic, pH5.5
-0.2
-0.2
+0.0
-0.2
-0.2
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.1
-0.2
+0.0
-0.2
-0.3
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.0
-0.2
-0.0
-0.3
-0.1
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
-0.1
-0.1
-0.0
-0.1
-0.3
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.1
-0.2
-0.1
-0.0
-0.2
ph; anaerobic
Anaerobic, pH5.5
-0.3
-0.1
-0.1
-0.3
+0.0
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.0
-0.2
-0.0
-0.2
-0.2
anaerobic no stress control
Anaerobic no stress control
-0.1
-0.0
-0.1
-0.3
-0.1
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
+0.0
-0.1
-0.1
-0.2
-0.3
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.1
-0.3
+0.0
-0.1
-0.1
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.2
-0.1
-0.0
-0.2
-0.1
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-0.1
-0.3
+0.0
-0.2
-0.1
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.1
-0.3
+0.0
-0.2
-0.1
anaerobic no stress control
Anaerobic no stress control
-0.1
-0.2
-0.1
-0.3
+0.1
ph; anaerobic
Anaerobic, pH7.5
+0.1
-0.2
-0.1
-0.1
-0.2
ph; anaerobic
Anaerobic, pH5.5
-0.0
-0.0
-0.0
-0.5
+0.1
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-0.0
-0.1
+0.1
-0.2
-0.3
anaerobic no stress control
Anaerobic no stress control
-0.2
-0.0
-0.0
-0.3
+0.1
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.1
-0.1
-0.1
-0.2
+0.2
ph; anaerobic
Anaerobic, pH7.5
-0.0
-0.1
+0.0
-0.3
+0.2
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.2
-0.1
+0.0
-0.1
+0.2
anaerobic no stress control
Anaerobic no stress control
-0.2
-0.2
+0.0
-0.2
+0.4
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ABCV34_RS13985
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