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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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500 nt
ABCV34_RS12735 and ABCV34_RS12740 are separated by 217 nucleotides
ABCV34_RS12740 and ABCV34_RS12745 overlap by 4 nucleotides
ABCV34_RS12745 and ABCV34_RS12750 are separated by 85 nucleotides
ABCV34_RS12750 and ABCV34_RS12755 are separated by 153 nucleotides
ABCV34_RS12735: ABCV34_RS12735 - single-stranded DNA-binding protein, at 2,703,054 to 2,703,539
_RS12735
ABCV34_RS12740: ABCV34_RS12740 - hypothetical protein, at 2,703,757 to 2,704,224
_RS12740
ABCV34_RS12745: ABCV34_RS12745 - type II toxin-antitoxin system RelE/ParE family toxin, at 2,704,221 to 2,704,517
_RS12745
ABCV34_RS12750: ABCV34_RS12750 - cell division protein, at 2,704,603 to 2,705,427
_RS12750
ABCV34_RS12755: ABCV34_RS12755 - DNA polymerase Y family protein, at 2,705,581 to 2,707,143
_RS12755
Group
Condition
ABCV34
_RS12735
ABCV34
_RS12740
ABCV34
_RS12745
ABCV34
_RS12750
ABCV34
_RS12755
ph; anaerobic
Anaerobic, pH5.5
N.D.
-1.6
-0.3
+0.3
-0.1
ph; anaerobic
Anaerobic, pH7.5
N.D.
-1.7
+0.1
+0.0
-0.0
aerobic no stress control
Aerobic no stress control
N.D.
-1.3
-0.1
+0.0
-0.2
aerobic metal stress
Aerobic; Nickel (II) chloride 20
N.D.
-1.3
+0.0
-0.0
-0.2
aerobic no stress control
Aerobic no stress control
N.D.
-1.2
-0.1
+0.0
-0.1
aerobic metal stress
Aerobic; copper (II) chloride 1
N.D.
-1.5
-0.0
+0.0
+0.1
aerobic metal stress
Aerobic; Cobalt chloride 2
N.D.
-1.6
+0.1
+0.2
-0.0
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
N.D.
-1.2
-0.1
-0.0
+0.1
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
N.D.
-1.2
-0.2
+0.1
+0.1
aerobic metal stress
Aerobic; FW104 COMM 1 X
N.D.
-1.3
-0.0
+0.2
-0.1
aerobic metal stress
Aerobic; Nickel (II) chloride 20
N.D.
-1.1
-0.1
+0.3
-0.1
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
N.D.
-1.2
-0.1
+0.3
-0.1
aerobic metal stress
Aerobic; Cobalt chloride 2
N.D.
-1.2
+0.0
+0.4
-0.2
aerobic metal stress
Aerobic; Nickel (II) chloride 20
N.D.
-1.4
+0.0
+0.4
-0.0
ph; aerobic
Aerobic, pH5.5
N.D.
-1.1
+0.0
+0.2
-0.1
aerobic metal stress
Aerobic; FW104 COMM 1 X
N.D.
-0.9
-0.2
+0.3
-0.1
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
-1.1
-0.2
+0.3
+0.1
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
N.D.
-1.0
-0.1
+0.1
+0.1
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
N.D.
-1.1
-0.2
+0.4
+0.1
aerobic metal stress
Aerobic; Aluminium sulfate 215
N.D.
-1.2
-0.0
+0.5
-0.1
aerobic metal stress
Aerobic; Uranyl acetate 80
N.D.
-1.2
+0.0
+0.5
-0.1
aerobic metal stress
Aerobic; Cadmium acetate 1
N.D.
-1.2
+0.1
+0.2
+0.1
aerobic metal stress
Aerobic; Nickel (II) chloride 20
N.D.
-1.2
-0.1
+0.6
-0.1
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
N.D.
-0.9
-0.1
+0.4
-0.1
aerobic metal stress
Aerobic; copper (II) chloride 1
N.D.
-0.9
+0.1
+0.3
-0.2
aerobic metal stress
Aerobic; FW104 COMM 1 X
N.D.
-1.1
+0.0
+0.4
+0.0
aerobic metal stress
Aerobic; Cobalt chloride 2
N.D.
-0.8
-0.1
+0.4
-0.1
ph; anaerobic
Anaerobic, pH5.5
N.D.
-0.9
-0.0
+0.5
+0.1
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
-0.8
-0.1
+0.5
+0.0
anaerobic no stress control
Anaerobic no stress control
N.D.
-0.7
-0.1
+0.6
-0.1
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