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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS11380 and ABCV34_RS11385 are separated by 277 nucleotides
ABCV34_RS11385 and ABCV34_RS11390 are separated by 217 nucleotides
ABCV34_RS11390 and ABCV34_RS11395 are separated by 157 nucleotides
ABCV34_RS11395 and ABCV34_RS11400 are separated by 21 nucleotides
ABCV34_RS11380: ABCV34_RS11380 - 50S ribosomal protein L14, at 2,410,837 to 2,411,205
_RS11380
ABCV34_RS11385: ABCV34_RS11385 - LapD/MoxY N-terminal periplasmic domain-containing protein, at 2,411,483 to 2,413,381
_RS11385
ABCV34_RS11390: ABCV34_RS11390 - TetR/AcrR family transcriptional regulator, at 2,413,599 to 2,414,360
_RS11390
ABCV34_RS11395: ABCV34_RS11395 - porin, at 2,414,518 to 2,415,858
_RS11395
ABCV34_RS11400: ABCV34_RS11400 - DUF4442 domain-containing protein, at 2,415,880 to 2,416,407
_RS11400
Group
Condition
ABCV34
_RS11380
ABCV34
_RS11385
ABCV34
_RS11390
ABCV34
_RS11395
ABCV34
_RS11400
aerobic metal stress
Aerobic; Cadmium acetate 1
N.D.
-0.1
-2.0
-0.0
+0.2
aerobic metal stress
Aerobic; Cadmium acetate 1
N.D.
+0.1
-1.8
+0.0
-0.0
aerobic metal stress
Aerobic; Uranyl acetate 80
N.D.
-0.1
-1.9
+0.0
+0.3
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
N.D.
+0.1
-1.8
+0.0
+0.0
aerobic no stress control
Aerobic no stress control
N.D.
+0.1
-1.6
+0.0
-0.0
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
+0.3
-2.0
+0.0
+0.2
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
N.D.
+0.2
-1.7
+0.1
+0.1
anaerobic no stress control
Anaerobic no stress control
N.D.
+0.2
-1.6
-0.1
+0.1
aerobic metal stress
Aerobic; Nickel (II) chloride 20
N.D.
-0.0
-1.4
-0.1
+0.2
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
N.D.
+0.2
-1.8
-0.0
+0.3
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
+0.2
-1.8
-0.1
+0.3
ph; aerobic
Aerobic, pH5.5
N.D.
+0.3
-1.7
-0.0
+0.2
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
N.D.
+0.3
-1.8
+0.0
+0.2
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
N.D.
+0.3
-1.5
+0.0
-0.1
aerobic metal stress
Aerobic; Cobalt chloride 2
N.D.
+0.1
-1.4
+0.1
+0.0
ph; aerobic
Aerobic, pH7.5
N.D.
+0.1
-1.4
-0.0
+0.1
aerobic metal stress
Aerobic; copper (II) chloride 1
N.D.
-0.1
-1.3
+0.1
+0.2
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
+0.2
-1.3
-0.1
+0.2
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
N.D.
+0.3
-1.4
-0.1
+0.3
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
+0.1
-1.2
-0.1
+0.3
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
+0.3
-1.3
-0.0
+0.2
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
+0.4
-1.4
+0.0
+0.1
ph; anaerobic
Anaerobic, pH5.5
N.D.
+0.5
-1.4
-0.0
+0.3
ph; aerobic
Aerobic, pH5.5
N.D.
+0.2
-1.1
+0.0
+0.3
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
N.D.
+0.4
-1.3
-0.0
+0.3
ph; anaerobic
Anaerobic, pH7.5
N.D.
+0.3
-1.2
+0.0
+0.4
ph; anaerobic
Anaerobic, pH5.5
N.D.
+0.6
-0.9
-0.1
+0.3
ph; anaerobic
Anaerobic, pH5.5
N.D.
+1.3
-0.6
-0.1
+0.2
ph; anaerobic
Anaerobic, pH5.5
N.D.
+1.6
-0.4
-0.2
+0.2
ph; anaerobic
Anaerobic, pH5.5
N.D.
+1.3
-0.2
-0.1
+0.3
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