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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS11160 and ABCV34_RS11165 are separated by 93 nucleotides
ABCV34_RS11165 and ABCV34_RS11170 overlap by 4 nucleotides
ABCV34_RS11170 and ABCV34_RS11175 are separated by 14 nucleotides
ABCV34_RS11175 and ABCV34_RS11180 are separated by 122 nucleotides
ABCV34_RS11160: ABCV34_RS11160 - hypothetical protein, at 2,381,561 to 2,382,052
_RS11160
ABCV34_RS11165: ABCV34_RS11165 - periplasmic heavy metal sensor, at 2,382,146 to 2,382,631
_RS11165
ABCV34_RS11170: ABCV34_RS11170 - hypothetical protein, at 2,382,628 to 2,383,089
_RS11170
ABCV34_RS11175: ABCV34_RS11175 - sigma-70 family RNA polymerase sigma factor, at 2,383,104 to 2,383,652
_RS11175
ABCV34_RS11180: ABCV34_RS11180 - ABC transporter ATP-binding protein, at 2,383,775 to 2,384,602
_RS11180
Group
Condition
ABCV34
_RS11160
ABCV34
_RS11165
ABCV34
_RS11170
ABCV34
_RS11175
ABCV34
_RS11180
ph; aerobic
Aerobic, pH7.5
+0.0
-0.3
N.D.
-0.1
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.1
-0.2
N.D.
-0.3
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
-0.1
-0.3
N.D.
+0.1
N.D.
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.1
-0.1
N.D.
-0.2
N.D.
aerobic no stress control
Aerobic no stress control
+0.2
-0.3
N.D.
-0.1
N.D.
aerobic no stress control
Aerobic no stress control
+0.2
-0.2
N.D.
-0.1
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.3
-0.1
N.D.
-0.3
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.0
-0.2
N.D.
+0.1
N.D.
aerobic metal stress
Aerobic; Cobalt chloride 2
+0.1
-0.2
N.D.
+0.1
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.2
-0.2
N.D.
-0.0
N.D.
ph; aerobic
Aerobic, pH5.5
+0.2
-0.1
N.D.
-0.1
N.D.
aerobic no stress control
Aerobic no stress control
+0.3
-0.2
N.D.
-0.0
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.3
N.D.
+0.3
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
+0.2
-0.2
N.D.
+0.1
N.D.
aerobic metal stress
Aerobic; Nickel (II) chloride 20
+0.1
-0.1
N.D.
+0.2
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.0
-0.1
N.D.
+0.3
N.D.
ph; anaerobic
Anaerobic, pH7.5
+0.1
-0.1
N.D.
+0.2
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.1
+0.1
N.D.
+0.2
N.D.
aerobic metal stress
Aerobic; FW104 COMM 1 X
+0.3
+0.1
N.D.
-0.1
N.D.
aerobic metal stress
Aerobic; Cadmium acetate 1
+0.2
-0.1
N.D.
+0.2
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.2
-0.0
N.D.
+0.2
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.1
+0.1
N.D.
+0.1
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.1
+0.1
N.D.
+0.2
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.2
+0.1
N.D.
+0.1
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.1
+0.2
N.D.
+0.1
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
+0.1
+0.2
N.D.
+0.3
N.D.
ph; aerobic
Aerobic, pH5.5
+0.2
+0.1
N.D.
+0.2
N.D.
ph; aerobic
Aerobic, pH5.5
+0.1
+0.2
N.D.
+0.2
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.3
+0.1
N.D.
+0.2
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.1
+0.2
N.D.
+0.3
N.D.
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