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Protein
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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS10840 and ABCV34_RS10845 overlap by 1 nucleotides
ABCV34_RS10845 and ABCV34_RS10850 are separated by 65 nucleotides
ABCV34_RS10850 and ABCV34_RS10855 overlap by 4 nucleotides
ABCV34_RS10855 and ABCV34_RS10860 are separated by 9 nucleotides
ABCV34_RS10840: ABCV34_RS10840 - ABC transporter permease, at 2,306,902 to 2,307,810
_RS10840
ABCV34_RS10845: ABCV34_RS10845 - A/G-specific adenine glycosylase, at 2,307,810 to 2,308,955
_RS10845
ABCV34_RS10850: ABCV34_RS10850 - rod shape-determining protein RodA, at 2,309,021 to 2,310,196
_RS10850
ABCV34_RS10855: ABCV34_RS10855 - penicillin-binding protein 2, at 2,310,193 to 2,312,253
_RS10855
ABCV34_RS10860: ABCV34_RS10860 - rod shape-determining protein MreD, at 2,312,263 to 2,312,784
_RS10860
Group
Condition
ABCV34
_RS10840
ABCV34
_RS10845
ABCV34
_RS10850
ABCV34
_RS10855
ABCV34
_RS10860
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-2.0
-0.2
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-2.1
-0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-2.1
+0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-2.2
+0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-2.0
+0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-1.9
-0.0
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH7.5
-1.7
-0.2
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-1.8
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-1.8
+0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-1.8
-0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-1.8
+0.0
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-1.6
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-1.7
+0.1
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-1.6
-0.1
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH7.5
-1.7
+0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-1.5
-0.1
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH7.5
-1.5
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-1.5
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-1.5
+0.0
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-1.2
-0.2
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-1.3
-0.1
N.D.
N.D.
N.D.
anaerobic no stress control
Anaerobic no stress control
-1.2
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-1.2
-0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-1.2
+0.0
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-1.1
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-1.2
+0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-1.1
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
-1.2
+0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-1.0
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-1.0
+0.1
N.D.
N.D.
N.D.
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