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Protein
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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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500 nt
ABCV34_RS10105 and ABCV34_RS10110 are separated by 10 nucleotides
ABCV34_RS10110 and ABCV34_RS10115 overlap by 4 nucleotides
ABCV34_RS10115 and ABCV34_RS10120 are separated by 2 nucleotides
ABCV34_RS10120 and ABCV34_RS10125 are separated by 18 nucleotides
ABCV34_RS10105: ABCV34_RS10105 - GGDEF domain-containing protein, at 2,164,419 to 2,165,735
_RS10105
ABCV34_RS10110: ABCV34_RS10110 - CinA family protein, at 2,165,746 to 2,166,252
_RS10110
ABCV34_RS10115: ABCV34_RS10115 - phosphatidylglycerophosphatase A, at 2,166,249 to 2,166,779
_RS10115
ABCV34_RS10120: ABCV34_RS10120 - thiamine-phosphate kinase, at 2,166,782 to 2,167,756
_RS10120
ABCV34_RS10125: ABCV34_RS10125 - transcription antitermination factor NusB, at 2,167,775 to 2,168,257
_RS10125
Group
Condition
ABCV34
_RS10105
ABCV34
_RS10110
ABCV34
_RS10115
ABCV34
_RS10120
ABCV34
_RS10125
ph; anaerobic
Anaerobic, pH5.5
-0.1
-0.6
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.1
-0.3
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-0.1
-0.3
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.3
-0.0
N.D.
N.D.
N.D.
aerobic no stress control
Aerobic no stress control
-0.0
-0.3
N.D.
N.D.
N.D.
aerobic no stress control
Aerobic no stress control
+0.1
-0.4
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Aluminium sulfate 215
+0.1
-0.3
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.1
-0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Cadmium acetate 1
+0.1
-0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Aluminium sulfate 215
+0.1
-0.2
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.2
+0.1
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.1
-0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.2
-0.3
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.3
-0.3
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.1
+0.2
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
-0.2
+0.3
N.D.
N.D.
N.D.
anaerobic no stress control
Anaerobic no stress control
-0.1
+0.2
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-0.1
+0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; FW104 COMM 1 X
-0.1
+0.3
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH7.5
+0.3
-0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.1
+0.2
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
+0.0
+0.3
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.2
+0.1
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.1
+0.3
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.0
+0.4
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
+0.3
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
+0.2
+0.3
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.0
+0.5
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; FW104 COMM 1 X
+0.1
+0.4
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; FW104 COMM 1 X
+0.2
+0.4
N.D.
N.D.
N.D.
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