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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS09770 and ABCV34_RS09775 are separated by 217 nucleotides
ABCV34_RS09775 and ABCV34_RS09780 overlap by 4 nucleotides
ABCV34_RS09780 and ABCV34_RS09785 are separated by 22 nucleotides
ABCV34_RS09785 and ABCV34_RS09790 are separated by 82 nucleotides
ABCV34_RS09770: ABCV34_RS09770 - Lrp/AsnC family transcriptional regulator, at 2,093,831 to 2,094,313
_RS09770
ABCV34_RS09775: ABCV34_RS09775 - 4-hydroxyphenylpyruvate dioxygenase, at 2,094,531 to 2,095,655
_RS09775
ABCV34_RS09780: ABCV34_RS09780 - nucleoside recognition domain-containing protein, at 2,095,652 to 2,096,638
_RS09780
ABCV34_RS09785: ABCV34_RS09785 - peptide-methionine (S)-S-oxide reductase MsrA, at 2,096,661 to 2,097,188
_RS09785
ABCV34_RS09790: ABCV34_RS09790 - c-type cytochrome, at 2,097,271 to 2,097,630
_RS09790
Group
Condition
ABCV34
_RS09770
ABCV34
_RS09775
ABCV34
_RS09780
ABCV34
_RS09785
ABCV34
_RS09790
anaerobic no stress control
Anaerobic no stress control
-0.2
-0.1
-0.1
-0.3
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.2
-0.1
-0.1
-0.1
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.2
-0.1
+0.0
-0.2
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.2
-0.1
-0.1
-0.1
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.1
-0.2
-0.0
-0.2
N.D.
ph; aerobic
Aerobic, pH5.5
-0.2
-0.1
-0.0
-0.2
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.1
-0.1
-0.1
-0.1
N.D.
ph; aerobic
Aerobic, pH7.5
-0.0
-0.1
-0.0
-0.3
N.D.
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
-0.1
-0.1
-0.2
-0.1
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.3
-0.0
-0.1
+0.0
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.1
-0.1
-0.1
-0.2
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
+0.0
-0.1
-0.2
-0.1
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.1
-0.1
-0.1
-0.1
N.D.
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
+0.0
-0.0
-0.1
-0.2
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.1
-0.1
-0.0
-0.1
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.1
-0.0
-0.1
-0.2
N.D.
aerobic no stress control
Aerobic no stress control
-0.1
-0.1
-0.0
+0.0
N.D.
aerobic metal stress
Aerobic; Nickel (II) chloride 20
+0.0
-0.0
-0.1
-0.2
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.1
-0.2
-0.1
+0.0
N.D.
anaerobic no stress control
Anaerobic no stress control
-0.1
-0.0
+0.0
-0.2
N.D.
ph; anaerobic
Anaerobic, pH7.5
-0.1
-0.1
+0.1
-0.1
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
-0.1
-0.1
-0.2
+0.1
N.D.
ph; aerobic
Aerobic, pH5.5
-0.0
-0.2
+0.1
-0.1
N.D.
ph; aerobic
Aerobic, pH5.5
-0.1
-0.1
+0.1
-0.1
N.D.
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.0
+0.1
-0.1
-0.2
N.D.
aerobic metal stress
Aerobic; Cadmium acetate 1
+0.1
-0.1
-0.1
-0.1
N.D.
aerobic metal stress
Aerobic; Cobalt chloride 2
+0.1
-0.1
-0.1
-0.1
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
-0.2
+0.1
+0.0
+0.1
N.D.
aerobic metal stress
Aerobic; FW104 COMM 1 X
+0.1
+0.1
+0.0
-0.2
N.D.
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.0
-0.1
-0.0
+0.2
N.D.
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