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Protein
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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS08540 and ABCV34_RS08545 are separated by 105 nucleotides
ABCV34_RS08545 and ABCV34_RS08550 overlap by 4 nucleotides
ABCV34_RS08550 and ABCV34_RS08555 are separated by 76 nucleotides
ABCV34_RS08555 and ABCV34_RS08560 overlap by 4 nucleotides
ABCV34_RS08540: ABCV34_RS08540 - LysR substrate-binding domain-containing protein, at 1,819,362 to 1,820,282
_RS08540
ABCV34_RS08545: ABCV34_RS08545 - cupin domain-containing protein, at 1,820,388 to 1,820,843
_RS08545
ABCV34_RS08550: ABCV34_RS08550 - carboxymuconolactone decarboxylase family protein, at 1,820,840 to 1,821,304
_RS08550
ABCV34_RS08555: ABCV34_RS08555 - NAD-dependent DNA ligase LigA, at 1,821,381 to 1,823,489
_RS08555
ABCV34_RS08560: ABCV34_RS08560 - cell division protein ZipA C-terminal FtsZ-binding domain-containing protein, at 1,823,486 to 1,824,484
_RS08560
Group
Condition
ABCV34
_RS08540
ABCV34
_RS08545
ABCV34
_RS08550
ABCV34
_RS08555
ABCV34
_RS08560
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.0
-0.5
-0.0
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.2
-0.4
-0.0
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.1
-0.2
-0.2
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.1
-0.2
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.1
-0.2
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.1
-0.4
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
-0.0
-0.2
-0.2
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.1
-0.2
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
+0.1
-0.3
-0.1
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-0.0
-0.2
-0.1
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
-0.0
-0.2
-0.1
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.2
-0.2
+0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.0
-0.2
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.1
-0.3
-0.0
N.D.
N.D.
ph; anaerobic
Anaerobic, pH7.5
-0.1
-0.2
+0.0
N.D.
N.D.
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
+0.0
-0.2
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.0
-0.1
-0.2
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
+0.1
-0.3
-0.0
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.0
-0.2
-0.0
N.D.
N.D.
anaerobic no stress control
Anaerobic no stress control
+0.1
-0.2
-0.0
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-0.0
-0.2
+0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.1
-0.1
-0.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
+0.1
-0.1
-0.1
N.D.
N.D.
aerobic no stress control
Aerobic no stress control
-0.0
+0.1
-0.2
N.D.
N.D.
aerobic metal stress
Aerobic; Aluminium sulfate 215
+0.0
+0.1
-0.2
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.2
+0.2
N.D.
N.D.
aerobic metal stress
Aerobic; Cobalt chloride 2
+0.2
-0.1
-0.0
N.D.
N.D.
aerobic metal stress
Aerobic; FW104 COMM 1 X
-0.1
+0.3
+0.1
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.1
+0.1
+0.1
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.1
+0.1
+0.1
N.D.
N.D.
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