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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS08410 and ABCV34_RS08415 are separated by 34 nucleotides
ABCV34_RS08415 and ABCV34_RS08420 are separated by 479 nucleotides
ABCV34_RS08420 and ABCV34_RS08425 are separated by 177 nucleotides
ABCV34_RS08425 and ABCV34_RS08430 are separated by 2 nucleotides
ABCV34_RS08410: ABCV34_RS08410 - HAD-IA family hydrolase, at 1,791,231 to 1,791,920
_RS08410
ABCV34_RS08415: ABCV34_RS08415 - RluA family pseudouridine synthase, at 1,791,955 to 1,792,914
_RS08415
ABCV34_RS08420: ABCV34_RS08420 - Rne/Rng family ribonuclease, at 1,793,394 to 1,796,267
_RS08420
ABCV34_RS08425: ABCV34_RS08425 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 1,796,445 to 1,797,326
_RS08425
ABCV34_RS08430: ABCV34_RS08430 - tryptophan synthase subunit alpha, at 1,797,329 to 1,798,156
_RS08430
Group
Condition
ABCV34
_RS08410
ABCV34
_RS08415
ABCV34
_RS08420
ABCV34
_RS08425
ABCV34
_RS08430
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.6
-0.3
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.4
-0.4
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.7
+0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
-0.5
-0.1
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-0.4
-0.2
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.5
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.3
-0.2
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.5
+0.0
N.D.
N.D.
N.D.
anaerobic no stress control
Anaerobic no stress control
-0.3
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.5
+0.0
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.4
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; copper (II) chloride 1 uM
-0.4
-0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.5
+0.1
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
-0.4
+0.1
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.7
+0.5
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-0.4
+0.2
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-0.3
+0.2
N.D.
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
-0.4
+0.2
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.5
+0.4
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
-0.3
+0.2
N.D.
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
-0.5
+0.5
N.D.
N.D.
N.D.
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
-0.2
+0.3
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
+0.2
+0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Cobalt chloride 2
+0.1
+0.4
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Nickel (II) chloride 20
+0.3
+0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.3
+0.2
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Aluminium sulfate 215
+0.2
+0.3
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Aluminium sulfate 215
+0.2
+0.4
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; Uranyl acetate 80
+0.2
+0.4
N.D.
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.2
+0.4
N.D.
N.D.
N.D.
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