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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS01615 and ABCV34_RS01620 overlap by 65 nucleotides
ABCV34_RS01620 and ABCV34_RS01625 are separated by 2 nucleotides
ABCV34_RS01625 and ABCV34_RS01630 are separated by 116 nucleotides
ABCV34_RS01630 and ABCV34_RS01635 are separated by 83 nucleotides
ABCV34_RS01615: ABCV34_RS01615 - acyl-CoA dehydrogenase family protein, at 346,582 to 348,228
_RS01615
ABCV34_RS01620: ABCV34_RS01620 - thermonuclease family protein, at 348,164 to 348,901
_RS01620
ABCV34_RS01625: ABCV34_RS01625 - DUF1178 family protein, at 348,904 to 349,413
_RS01625
ABCV34_RS01630: ABCV34_RS01630 - elongation factor P, at 349,530 to 350,087
_RS01630
ABCV34_RS01635: ABCV34_RS01635 - elongation factor P maturation arginine rhamnosyltransferase EarP, at 350,171 to 351,265
_RS01635
Group
Condition
ABCV34
_RS01615
ABCV34
_RS01620
ABCV34
_RS01625
ABCV34
_RS01630
ABCV34
_RS01635
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.2
-0.2
-1.5
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.6
-0.9
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-0.2
+0.2
-1.2
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.1
-0.3
-1.0
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.2
-1.1
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.2
-0.2
-0.9
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
+0.1
-0.0
-0.9
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
+0.1
-0.2
-0.8
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
-0.0
-0.5
-0.4
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
+0.2
-0.3
-0.7
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.0
-0.2
-0.6
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
-0.2
-0.2
-0.4
N.D.
N.D.
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
+0.1
-0.2
-0.6
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
-0.2
+0.0
-0.6
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
+0.0
-0.3
-0.4
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
+0.1
-0.0
-0.7
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.0
-0.7
N.D.
N.D.
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
+0.0
+0.1
-0.8
N.D.
N.D.
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
+0.1
-0.2
-0.5
N.D.
N.D.
ph; anaerobic
Anaerobic, pH5.5
+0.1
-0.0
-0.7
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
+0.2
-0.3
-0.4
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.2
-0.2
-0.5
N.D.
N.D.
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
+0.1
+0.1
-0.5
N.D.
N.D.
aerobic metal stress
Aerobic; copper (II) chloride 1
+0.2
+0.2
-0.4
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
+0.1
+0.3
-0.5
N.D.
N.D.
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
+0.2
+0.4
-0.6
N.D.
N.D.
ph; aerobic
Aerobic, pH5.5
+0.2
-0.3
+0.3
N.D.
N.D.
aerobic metal stress
Aerobic; Cobalt chloride 2
-0.2
-0.1
+0.5
N.D.
N.D.
ph; aerobic
Aerobic, pH7.5
-0.0
-0.1
+0.6
N.D.
N.D.
aerobic no stress control
Aerobic no stress control
-0.1
-0.1
+0.8
N.D.
N.D.
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