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Fitness for 5 genes in
Castellaniella sp019104865 MT123
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABCV34_RS00570 and ABCV34_RS00575 are separated by 22 nucleotides
ABCV34_RS00575 and ABCV34_RS00580 overlap by 4 nucleotides
ABCV34_RS00580 and ABCV34_RS00585 overlap by 4 nucleotides
ABCV34_RS00585 and ABCV34_RS00590 are separated by 108 nucleotides
ABCV34_RS00570: ABCV34_RS00570 - L-threonylcarbamoyladenylate synthase, at 122,096 to 123,208
_RS00570
ABCV34_RS00575: ABCV34_RS00575 - ABC transporter ATP-binding protein, at 123,231 to 123,941
_RS00575
ABCV34_RS00580: ABCV34_RS00580 - ABC transporter ATP-binding protein, at 123,938 to 124,693
_RS00580
ABCV34_RS00585: ABCV34_RS00585 - branched-chain amino acid ABC transporter permease, at 124,690 to 125,598
_RS00585
ABCV34_RS00590: ABCV34_RS00590 - branched-chain amino acid ABC transporter permease, at 125,707 to 126,588
_RS00590
Group
Condition
ABCV34
_RS00570
ABCV34
_RS00575
ABCV34
_RS00580
ABCV34
_RS00585
ABCV34
_RS00590
anaerobic no stress control
Anaerobic no stress control
N.D.
-0.4
+0.1
-0.2
-0.2
ph; anaerobic
Anaerobic, pH5.5
N.D.
-0.3
-0.0
-0.1
-0.5
anaerobic no stress control
Anaerobic no stress control
N.D.
-0.3
-0.2
-0.1
-0.1
anaerobic no stress control
Anaerobic no stress control
N.D.
-0.1
-0.2
-0.1
-0.3
ph; anaerobic
Anaerobic, pH5.5
N.D.
-0.2
-0.1
-0.3
-0.1
anaerobic metal stress
Anaerobic; Nickel (II) chloride 20 uM
N.D.
-0.2
-0.3
-0.2
-0.0
ph; anaerobic
Anaerobic, pH7.5
N.D.
-0.3
-0.0
-0.1
-0.2
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
N.D.
-0.3
-0.1
-0.1
-0.1
ph; aerobic
Aerobic, pH5.5
N.D.
-0.3
-0.0
-0.3
-0.0
anaerobic metal stress
Anaerobic; Cadmium acetate 1 uM
N.D.
-0.2
-0.2
-0.0
-0.1
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
-0.3
+0.0
-0.3
-0.0
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
-0.3
-0.1
-0.1
-0.1
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
-0.4
-0.1
-0.1
+0.1
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
N.D.
+0.0
-0.2
-0.1
-0.2
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
-0.4
-0.1
+0.0
+0.0
ph; anaerobic
Anaerobic, pH5.5
N.D.
+0.2
-0.1
-0.1
-0.5
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
N.D.
-0.3
+0.1
-0.0
-0.2
aerobic metal stress
Aerobic; Uranyl acetate 80
N.D.
-0.4
-0.1
+0.1
+0.0
ph; aerobic
Aerobic, pH7.5
N.D.
+0.1
-0.4
-0.1
-0.0
ph; aerobic
Aerobic, pH5.5
N.D.
+0.2
-0.2
-0.2
-0.1
anaerobic metal stress
Anaerobic; ammonium iron(II) sulfate 10 uM
N.D.
+0.1
+0.0
-0.3
-0.2
anaerobic metal stress
Anaerobic; Aluminium sulfate 215 uM
N.D.
+0.3
-0.2
-0.2
-0.2
anaerobic metal stress
Anaerobic; FW104 COMM 1 X
N.D.
-0.1
+0.2
-0.0
-0.2
anaerobic metal stress
Anaerobic; Uranyl acetate 80 uM
N.D.
+0.0
+0.2
-0.2
-0.2
anaerobic metal stress
Anaerobic; Cobalt chloride 2 uM
N.D.
+0.2
-0.1
-0.2
-0.0
aerobic metal stress
Aerobic; Uranyl acetate 80
N.D.
+0.4
-0.0
-0.1
-0.1
ph; aerobic
Aerobic, pH5.5
N.D.
+0.2
+0.2
-0.1
-0.1
aerobic metal stress
Aerobic; Uranyl acetate 80
N.D.
+0.3
+0.1
-0.1
-0.1
aerobic metal stress
Aerobic; ammonium iron(II) sulfate 10
N.D.
+0.3
+0.2
-0.0
-0.1
aerobic metal stress
Aerobic; Cobalt chloride 2
N.D.
+0.2
+0.2
-0.0
+0.1
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