Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BT4714	BT4715	BT4716	BT4717	BT4718
carbon source	Heparin from porcine intestinal mucosa (C)	+0.2	-0.1	-1.0	-0.7	-0.9
carbon source	Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)	-0.4	-0.6	-0.3	-0.4	-0.5
carbon source	Mannan from Saccharomyces cerevisiae (C)	-0.5	-0.6	-0.6	-0.9	+0.4
carbon source	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)	-0.3	-0.9	-0.7	-0.2	+0.1
survival	aerobic shaking 48 hr copy B	+0.1	-0.4	-1.4	+0.1	-0.3
mouse_peg_treatment	PEG (Day 1) - Cage4;Mouse1	+0.0	-0.9	-0.3	-0.6	-0.1
phage	DAC16_cps7_10MOI	+0.1	-1.4	-0.4	+0.1	-0.1
phage	SJC25_Acapsular_0.1MOI	+0.4	-1.0	-0.7	-0.2	-0.2
mouse_post_colonization	Post-colonization (Day 2) - Cage3;Mouse2	+0.1	-0.2	-1.2	+0.1	-0.4
stress	BHIS with Paraquat dichloride 0.1 mg/ml	+0.3	-0.2	-0.7	-0.0	-0.8
mouse_peg_treatment	PEG (Day 3) - Cage1;Mouse2	+0.1	-0.7	-0.7	+0.3	-0.5
stress	BHIS with Thioridazine 0.0125 mM	+0.1	-0.2	-0.7	+0.3	-0.8
phage	SJC16_cps8_1MOI	+0.6	-0.4	-1.0	+0.1	-0.6
phage	HNL05_cps7_0.1MOI	+0.0	-0.8	-0.6	+0.4	-0.3
phage	ARB14_cps1_0.1MOI	+0.2	-0.2	-0.8	+0.4	-0.5
stress	Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM	+0.4	-1.2	-0.1	+0.4	-0.3
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.5	-0.3	-0.7	+0.3	-0.6
stress	BHIS with Sulfaquinoxaline 0.1 mM	+0.4	-0.9	-0.4	-0.1	+0.3
phage	SJC16_cps8_10MOI	+0.5	-0.1	-0.8	+0.3	-0.4
phage	SJC12_cps8_0.1MOI	+0.4	-0.3	-0.3	+0.4	-0.7
mouse_coculture	cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.3	+0.4	-0.9	+0.2	-0.3
stress	BHIS with Sulfamonomethoxine 0.2 mM	+0.5	+0.2	-0.6	+0.3	-0.5
mouse_coculture	cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003	+0.3	+0.5	-0.7	+0.2	-0.3
stress	BHIS with Chlorpromazine 0.2 mM	+0.3	-0.0	-0.4	+0.8	-0.5
stress	Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM	+0.5	-0.7	-0.1	+0.4	+0.4
nitrogen source	L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen	+0.2	-0.0	-0.7	+1.1	+0.0
survival	aerobic shaking 48 hr copy A	+0.4	+0.2	-0.8	+0.7	+0.2
stress	BHIS with Simvastatin 30 uM	+0.3	+0.6	-0.5	-0.3	+0.7
stress	Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7	+0.2	+1.0	-0.1	+0.4	-0.3
stress	BHIS with Lithocholic 0.4 mg/ml	+0.3	+0.7	+0.4	+0.6	+0.1