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Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT4707 and BT4708 are separated by 24 nucleotides
BT4708 and BT4709 are separated by 42 nucleotides
BT4709 and BT4710 are separated by 23 nucleotides
BT4710 and BT4711 are separated by 17 nucleotides
BT4707: BT4707 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 6,176,918 to 6,180,217
BT4707
BT4708: BT4708 - hypothetical protein (NCBI ptt file), at 6,180,242 to 6,181,837
BT4708
BT4709: BT4709 - glycosyl hydrolase (NCBI ptt file), at 6,181,880 to 6,182,821
BT4709
BT4710: BT4710 - conserved hypothetical protein (NCBI ptt file), at 6,182,845 to 6,184,053
BT4710
BT4711: BT4711 - conserved hypothetical protein (NCBI ptt file), at 6,184,071 to 6,185,033
BT4711
Group
Condition
BT4707
BT4708
BT4709
BT4710
BT4711
mouse_peg_treatment
PEG (Day 3) - Cage2;Mouse1
-0.0
-0.7
-0.9
+0.3
-0.4
stress
Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
+0.2
-0.6
-0.6
+0.1
-0.7
stress
BHIS with Cefoxitin 0.025 mM
-0.5
-0.6
+0.1
-0.3
-0.2
stress
BHIS with Cephalothin 0.2 mM
-0.1
-0.8
-0.3
-0.4
+0.1
stress
BHIS with Chlorpromazine 0.1 mM
-0.0
-1.3
-0.1
+0.1
-0.2
phage
HNL05_cps7_0.1MOI
+0.0
-0.9
-0.4
-0.3
+0.1
stress
BHIS with Cephalothin 0.1 mM
-0.5
-0.8
-0.4
+0.3
+0.1
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
+0.3
-0.3
-0.5
-0.4
-0.3
stress
BHIS with Sulfaquinoxaline 0.1 mM
-0.3
-0.3
-0.6
-0.3
+0.4
mouse_coculture
cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003
+0.2
-0.3
-0.8
-0.3
+0.2
phage
SJC12_cps8_0.1MOI
-0.1
-1.0
-0.4
+0.4
+0.2
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
+0.1
-0.6
+0.4
-0.4
-0.4
carbon source
D-Trehalose 20mM (C)
+0.2
+0.2
-1.6
+0.2
+0.2
stress
BHIS with Paraquat dichloride 0.1 mg/ml
-0.4
-0.9
+0.2
+0.2
+0.1
carbon source
Heparin from porcine intestinal mucosa (C)
-0.4
-0.9
+0.3
+0.1
+0.1
stress
BHIS with Thioridazine 0.025 mM
+0.0
-0.9
-0.3
+0.6
-0.1
mouse_peg_treatment
PEG (Day 3) - Cage3;Mouse2
-0.2
-0.9
-0.4
+0.5
+0.4
stress
BHIS with Chlorpromazine 0.2 mM
+0.0
-1.1
+0.7
+0.2
-0.2
carbon source
Heparin from porcine intestinal mucosa (C)
-0.2
-0.8
+0.7
-0.0
+0.0
phage
SJC15_cps8_1MOI
+0.0
-0.6
+0.7
-0.1
-0.2
stress
BHIS with Chlorpromazine 0.1 mM
-0.1
-0.8
+0.2
+0.1
+0.4
phage
ARB14_cps1_0.1MOI
+0.3
-0.7
+0.5
+0.2
-0.6
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
+0.0
+0.1
-0.4
+0.8
-0.6
phage
SJC12_cps8_0.1MOI
+0.2
-0.9
+0.4
+0.2
+0.1
stress
Varel_Bryant_medium_Glucose with Rifampicin 0.0001953125 mM
+0.2
-0.1
-0.5
+0.4
+0.4
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
+0.2
+0.6
-0.6
+0.3
+0.2
stress
Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM
-0.4
+0.2
+0.9
-0.3
+0.3
mouse_post_colonization
Post-colonization (Day 1) - Cage6;Mouse1
+0.3
+0.1
-0.2
+0.8
+0.3
carbon source
Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C)
-0.3
+0.7
+0.4
+0.2
+0.4
nitrogen source
L-aspartic (N)
-0.1
+0.7
+0.2
+0.6
+0.2
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