Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4669 and BT4670 are separated by 11 nucleotidesBT4670 and BT4671 are separated by 50 nucleotidesBT4671 and BT4672 are separated by 2 nucleotidesBT4672 and BT4673 are separated by 115 nucleotides BT4669: BT4669 - hypothetical protein (NCBI ptt file), at 6,119,767 to 6,121,479 BT4669 BT4670: BT4670 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 6,121,491 to 6,123,065 BT4670 BT4671: BT4671 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 6,123,116 to 6,126,094 BT4671 BT4672: BT4672 - hypothetical protein (NCBI ptt file), at 6,126,097 to 6,126,321 BT4672 BT4673: BT4673 - two-component system sensor histidine kinase (NCBI ptt file), at 6,126,437 to 6,129,985 BT4673
Group Condition BT4669 BT4670 BT4671 BT4672 BT4673
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -1.6 -1.6 -1.4 -2.3 -1.6
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -1.8 -1.4 -1.4 -2.7 -1.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -1.9 -1.5 -1.6 -1.9 -1.5
carbon source Rhamnogalacturonan - from potato (C) -1.1 -1.6 -1.2 -2.5 -1.7
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -1.9 -1.3 -1.5 -1.4 -1.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -1.4 -1.0 -1.2 -2.6 -1.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -1.8 -1.4 -1.4 -1.8 -1.2
carbon source Rhamnogalacturonan - from potato (C) -1.2 -1.3 -1.5 -1.6 -1.7
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -1.5 -1.2 -1.3 -1.7 -1.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -1.4 -1.2 -1.7 -1.2 -1.3
carbon source 1,4-B-D-Galactobiose (C) -1.6 -1.4 -1.2 -1.0 -1.3
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -0.6 +1.4 +1.6 +1.6 +1.6
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 +0.3 +1.2 +1.4 +1.6 +1.5
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 +0.1 +1.2 +1.3 +2.2 +1.2
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 +0.0 +1.6 +1.4 +1.6 +1.5
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 +0.4 +1.3 +1.4 +1.4 +1.6
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse1 +0.4 +1.4 +1.5 +1.6 +1.4
mouse_post_colonization Post-colonization (Day 12) - Cage6;Mouse1 -0.0 +1.3 +1.3 +2.3 +1.4
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 +0.7 +1.9 +1.6 +1.0 +1.6
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 +0.5 +1.7 +1.4 +2.1 +1.5
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 +0.3 +1.9 +1.7 +1.5 +1.9
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.7 +1.5 +1.8 +1.5 +2.0
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse2 -0.1 +1.8 +2.0 +2.3 +2.0
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.7 +1.7 +1.6 +2.2 +1.8
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 +1.2 +1.6 +1.9 +1.8 +2.0
mouse_post_colonization Post-colonization (Day 14) - Cage4;Mouse4 +1.0 +1.8 +2.1 +2.6 +2.0
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 +0.5 +2.3 +2.3 +2.5 +2.2
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 +0.6 +2.5 +2.7 +2.2 +2.7
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 +1.4 +3.0 +2.9 +3.0 +2.9
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +1.6 +3.2 +3.1 +3.3 +3.1
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