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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT4669 and BT4670 are separated by 11 nucleotides
BT4670 and BT4671 are separated by 50 nucleotides
BT4671 and BT4672 are separated by 2 nucleotides
BT4672 and BT4673 are separated by 115 nucleotides
BT4669: BT4669 - hypothetical protein (NCBI ptt file), at 6,119,767 to 6,121,479
BT4669
BT4670: BT4670 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 6,121,491 to 6,123,065
BT4670
BT4671: BT4671 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 6,123,116 to 6,126,094
BT4671
BT4672: BT4672 - hypothetical protein (NCBI ptt file), at 6,126,097 to 6,126,321
BT4672
BT4673: BT4673 - two-component system sensor histidine kinase (NCBI ptt file), at 6,126,437 to 6,129,985
BT4673
Group
Condition
BT4669
BT4670
BT4671
BT4672
BT4673
carbon source
Galactan from Potato; autoclaved 2.5 mg/ml (C)
-1.6
-1.6
-1.4
-2.3
-1.6
carbon source
Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
-1.8
-1.4
-1.4
-2.7
-1.3
carbon source
Galactan from Potato; filtered 2.5 mg/ml (C)
-1.9
-1.5
-1.6
-1.9
-1.5
carbon source
Rhamnogalacturonan - from potato (C)
-1.1
-1.6
-1.2
-2.5
-1.7
carbon source
Galactan from Potato; autoclaved 2.5 mg/ml (C)
-1.9
-1.3
-1.5
-1.4
-1.6
carbon source
Pectic galactan from potato; filtered 2.5 mg/ml (C)
-1.4
-1.0
-1.2
-2.6
-1.3
carbon source
Galactan from Potato; filtered 2.5 mg/ml (C)
-1.8
-1.4
-1.4
-1.8
-1.2
carbon source
Rhamnogalacturonan - from potato (C)
-1.2
-1.3
-1.5
-1.6
-1.7
carbon source
Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
-1.5
-1.2
-1.3
-1.7
-1.3
carbon source
Pectic galactan from potato; filtered 2.5 mg/ml (C)
-1.4
-1.2
-1.7
-1.2
-1.3
carbon source
1,4-B-D-Galactobiose (C)
-1.6
-1.4
-1.2
-1.0
-1.3
mouse_post_colonization
Post-colonization (Day 8) - Cage6;Mouse2
-0.6
+1.4
+1.6
+1.6
+1.6
mouse_post_colonization
Post-colonization (Day 12) - Cage4;Mouse5
+0.3
+1.2
+1.4
+1.6
+1.5
mouse_post_colonization
Post-colonization (Day 14) - Cage1;Mouse3
+0.1
+1.2
+1.3
+2.2
+1.2
mouse_peg_treatment
PEG (Day 1) - Cage4;Mouse1
+0.0
+1.6
+1.4
+1.6
+1.5
mouse_post_colonization
Post-colonization (Day 14) - Cage5;Mouse1
+0.4
+1.3
+1.4
+1.4
+1.6
mouse_post_colonization
Post-colonization (Day 10) - Cage3;Mouse1
+0.4
+1.4
+1.5
+1.6
+1.4
mouse_post_colonization
Post-colonization (Day 12) - Cage6;Mouse1
-0.0
+1.3
+1.3
+2.3
+1.4
mouse_peg_treatment
PEG (Day 1) - Cage2;Mouse1
+0.7
+1.9
+1.6
+1.0
+1.6
mouse_peg_treatment
PEG (Day 1) - Cage3;Mouse4
+0.5
+1.7
+1.4
+2.1
+1.5
mouse_peg_treatment
PEG (Day 2) - Cage3;Mouse3
+0.3
+1.9
+1.7
+1.5
+1.9
mouse_peg_treatment
PEG (Day 2) - Cage5;Mouse1
+0.7
+1.5
+1.8
+1.5
+2.0
mouse_post_colonization
Post-colonization (Day 10) - Cage6;Mouse2
-0.1
+1.8
+2.0
+2.3
+2.0
mouse_peg_treatment
PEG (Day 2) - Cage4;Mouse1
+0.7
+1.7
+1.6
+2.2
+1.8
mouse_recovery_after_peg
Post-colonization (Day 14) - Cage4;Mouse2
+1.2
+1.6
+1.9
+1.8
+2.0
mouse_post_colonization
Post-colonization (Day 14) - Cage4;Mouse4
+1.0
+1.8
+2.1
+2.6
+2.0
mouse_post_colonization
Post-colonization (Day 14) - Cage3;Mouse1
+0.5
+2.3
+2.3
+2.5
+2.2
mouse_peg_treatment
PEG (Day 1) - Cage3;Mouse1
+0.6
+2.5
+2.7
+2.2
+2.7
mouse_peg_treatment
PEG (Day 3) - Cage3;Mouse2
+1.4
+3.0
+2.9
+3.0
+2.9
mouse_peg_treatment
PEG (Day 3) - Cage2;Mouse1
+1.6
+3.2
+3.1
+3.3
+3.1
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