Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4417 and BT4418 are separated by 116 nucleotidesBT4418 and BT4419 are separated by 13 nucleotidesBT4419 and BT4420 are separated by 818 nucleotidesBT4420 and BT4421 are separated by 56 nucleotides BT4417: BT4417 - HD superfamily hydrolase (NCBI ptt file), at 5,820,481 to 5,822,016 BT4417 BT4418: BT4418 - hypothetical protein (NCBI ptt file), at 5,822,133 to 5,822,423 BT4418 BT4419: BT4419 - hypothetical protein (NCBI ptt file), at 5,822,437 to 5,822,730 BT4419 BT4420: BT4420 - conserved hypothetical protein, with a conserved domain (NCBI ptt file), at 5,823,549 to 5,824,637 BT4420 BT4421: BT4421 - conserved hypothetical protein (NCBI ptt file), at 5,824,694 to 5,825,065 BT4421
Group Condition BT4417 BT4418 BT4419 BT4420 BT4421
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 N.D. N.D. N.D. -1.1 -2.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen N.D. N.D. N.D. -0.7 -2.4
stress BHIS with Benzethonium chloride 0.003 mM N.D. N.D. N.D. -0.6 -2.5
stress BHIS with Dimethyl Sulfoxide 10 vol% N.D. N.D. N.D. -0.5 -2.5
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen N.D. N.D. N.D. -0.3 -2.7
carbon source Beta-Lactose 2.5 mg/ml (C) N.D. N.D. N.D. -0.5 -2.5
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen N.D. N.D. N.D. +0.0 -3.0
carbon source Mannan from Saccharomyces cerevisiae (C) N.D. N.D. N.D. -2.2 -0.7
carbon source D-Trehalose 20mM (C) N.D. N.D. N.D. -0.4 -2.5
stress BHIS with Dimethyl Sulfoxide 10 vol% N.D. N.D. N.D. -0.7 -2.1
carbon source D-Glucose (C) N.D. N.D. N.D. -1.0 -1.7
stress BHIS with Dimetridazole 0.0125 mM N.D. N.D. N.D. -0.8 -1.7
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.0125 mM N.D. N.D. N.D. +0.6 -2.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen N.D. N.D. N.D. +0.5 -2.3
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. N.D. +0.5 -2.0
stress BHIS with Levofloxacin 0.0015625 mM N.D. N.D. N.D. +0.5 -1.9
mouse_post_colonization Post-colonization (Day 10) - Cage2;Mouse1 N.D. N.D. N.D. +0.6 -1.8
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen N.D. N.D. N.D. +0.7 -1.8
varel_bryant_medium_glucose Varel_Bryant_medium_Glucose N.D. N.D. N.D. -0.8 +2.1
stress BHIS with 5-Fluorouracil 0.1 mM N.D. N.D. N.D. +1.3 +1.1
phage DAC20_cps8_1MOI N.D. N.D. N.D. +0.8 +1.6
stress BHIS with Doxycycline hyclate 0.0001953125 mM N.D. N.D. N.D. +1.3 +1.4
stress BHIS with Chlorpromazine 0.1 mM N.D. N.D. N.D. +1.2 +1.5
stress BHIS with Trimethoprim 0.00625 mM N.D. N.D. N.D. +1.6 +1.2
stress BHIS with Thioridazine 0.0125 mM N.D. N.D. N.D. +1.3 +1.7
stress BHIS with Chlorpromazine 0.2 mM N.D. N.D. N.D. +1.4 +1.6
stress BHIS with Trimethoprim 0.0125 mM N.D. N.D. N.D. +2.1 +1.2
stress BHIS with Trimethoprim 0.00625 mM N.D. N.D. N.D. +1.6 +2.1
stress BHIS with 5-Fluorouracil 0.2 mM N.D. N.D. N.D. +1.7 +2.5
stress BHIS with Cefoxitin 0.025 mM N.D. N.D. N.D. -0.0 +4.8
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