Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4341 and BT4342 are separated by 205 nucleotidesBT4342 and BT4343 are separated by 36 nucleotidesBT4343 and BT4344 are separated by 65 nucleotidesBT4344 and BT4345 are separated by 168 nucleotides BT4341: BT4341 - hypothetical protein (NCBI ptt file), at 5,717,702 to 5,719,861 BT4341 BT4342: BT4342 - RNA-directed DNA polymerase (NCBI ptt file), at 5,720,067 to 5,721,200 BT4342 BT4343: BT4343 - conserved hypothetical protein (NCBI ptt file), at 5,721,237 to 5,722,175 BT4343 BT4344: BT4344 - conserved hypothetical protein, putative DNA helicase (NCBI ptt file), at 5,722,241 to 5,727,058 BT4344 BT4345: BT4345 - 30S ribosomal protein S1 (NCBI ptt file), at 5,727,227 to 5,729,026 BT4345
Group Condition BT4341 BT4342 BT4343 BT4344 BT4345
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 -1.1 -0.5 -1.5 +0.1 N.D.
stress BHIS with Dimethyl Sulfoxide 9 vol% -0.5 -0.9 -1.3 +0.3 N.D.
stress BHIS with Chenodeoxycholic 0.25 mg/ml -0.2 +0.2 -2.4 +0.1 N.D.
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -2.1 -0.4 +0.0 +0.2 N.D.
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -2.2 +0.5 -0.4 -0.1 N.D.
stress BHIS with Lithocholic 0.4 mg/ml +0.2 -0.1 -2.4 +0.1 N.D.
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -2.5 +0.1 +0.2 +0.1 N.D.
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -1.8 -0.3 +0.4 -0.3 N.D.
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -2.1 +0.0 -0.5 +0.5 N.D.
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -2.2 +0.1 -0.1 +0.2 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -2.2 +0.1 -0.0 +0.2 N.D.
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -1.8 +0.4 -0.5 +0.0 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -2.3 +0.4 -0.1 +0.3 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 -2.2 +0.1 +0.3 +0.2 N.D.
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse1 -2.2 +0.2 -0.0 +0.4 N.D.
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 -2.2 +0.4 -0.1 +0.3 N.D.
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -1.8 +0.0 -0.4 +0.7 N.D.
stress BHIS with Lithocholic 0.4 mg/ml +0.2 +0.2 -2.0 +0.2 N.D.
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -2.3 +0.3 +0.2 +0.4 N.D.
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -2.1 +0.6 +0.0 +0.2 N.D.
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -1.8 -0.1 -0.2 +0.7 N.D.
mouse Post-colonization (Day 7) - Cage1B;Mouse5 -1.7 +0.3 -0.2 +0.4 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse3 -2.1 +0.4 +0.4 +0.2 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 -1.9 +0.5 +0.3 +0.1 N.D.
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -1.7 +0.4 +0.5 +0.0 N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 -1.7 +0.4 +0.2 +0.4 N.D.
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +0.2 -1.4 +0.8 -0.3 N.D.
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -1.2 +1.2 +0.2 +0.1 N.D.
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM -0.4 +0.6 +1.1 -0.5 N.D.
stress BHIS with Trimethoprim 0.0125 mM -0.3 +0.8 +1.9 -0.1 N.D.
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