Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4287 and BT4288 are separated by 80 nucleotidesBT4288 and BT4289 are separated by 43 nucleotidesBT4289 and BT4290 are separated by 757 nucleotidesBT4290 and BT4291 are separated by 173 nucleotides BT4287: BT4287 - hypothetical protein (NCBI ptt file), at 5,646,266 to 5,646,934 BT4287 BT4288: BT4288 - ABC transporter ATP-binding protein (NCBI ptt file), at 5,647,015 to 5,649,240 BT4288 BT4289: BT4289 - putative hemolysin secretion protein (NCBI ptt file), at 5,649,284 to 5,650,534 BT4289 BT4290: BT4290 - transposase (NCBI ptt file), at 5,651,292 to 5,652,011 BT4290 BT4291: BT4291 - conserved hypothetical protein (NCBI ptt file), at 5,652,185 to 5,652,568 BT4291
Group Condition BT4287 BT4288 BT4289 BT4290 BT4291
stress BHIS with Dimethyl Sulfoxide 10 vol% -1.1 -0.6 +0.2 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Antimycin A 0.2 mM -0.8 -0.2 -0.3 N.D. N.D.
stress BHIS with Zinc Pyrithione 0.025 mM -1.0 -0.1 -0.1 N.D. N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (~7.5 mM 3-keto-trehalose) 0.5x (C) -1.0 -0.4 +0.2 N.D. N.D.
phage DAC20_cps8_1MOI -0.8 +0.1 -0.4 N.D. N.D.
mouse_post_colonization Post-colonization (Day 1) - Cage4;Mouse1 -0.4 -0.3 -0.4 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Ramoplanin 0.0015625 mM -0.7 +0.1 -0.5 N.D. N.D.
stress BHIS with Dimetridazole 0.025 mM -0.6 -0.5 +0.1 N.D. N.D.
stress BHIS with Chenodeoxycholic 0.25 mg/ml +0.1 -0.4 -0.7 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Anhydrotetracycline 0.00078125 mM -1.0 +0.2 -0.1 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.2 mM -0.4 +0.2 -0.7 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Cephalothin 0.1 mM -0.8 -0.3 +0.2 N.D. N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -0.6 +0.2 -0.4 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.025 mM -0.5 +0.2 -0.4 N.D. N.D.
nitrogen source L-aspartic (N) -0.7 +0.2 -0.2 N.D. N.D.
carbon source Red Arabinan from sugar-beet (C) +0.4 -0.2 -0.7 N.D. N.D.
stress BHIS with Levofloxacin 0.0015625 mM +0.3 -0.6 +0.3 N.D. N.D.
phage HNL05_cps7_0.1MOI -0.4 +0.3 +0.4 N.D. N.D.
stress BHIS with Sulfaquinoxaline 0.1 mM +0.5 +0.3 -0.3 N.D. N.D.
stress Varel_Bryant medium with Chlorpromazine 0.05 mM -0.4 +0.4 +0.6 N.D. N.D.
stress BHIS with Simvastatin 30 uM +0.8 -0.4 +0.3 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Econazole nitrate salt 0.025 mM +1.0 -0.3 +0.0 N.D. N.D.
mouse_post_colonization Post-colonization (Day 6) - Cage6;Mouse2 +0.8 +0.2 -0.2 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM +0.6 -0.2 +0.4 N.D. N.D.
stress BHIS with Cefoxitin 0.025 mM +1.0 +0.3 -0.3 N.D. N.D.
mouse_post_colonization Post-colonization (Day 1) - Cage7;Mouse2 +0.7 -0.0 +0.4 N.D. N.D.
stress BHIS with Chlorpromazine 0.1 mM +0.4 +0.4 +0.3 N.D. N.D.
carbon source Hyaluronic from Streptococcus equi +1.0 +0.4 -0.1 N.D. N.D.
carbon source Hyaluronic from Streptococcus equi +1.2 +0.4 -0.1 N.D. N.D.
stress BHIS with Cephalothin 0.2 mM +1.1 +0.1 +0.6 N.D. N.D.
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