Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4117 and BT4118 are separated by 3 nucleotidesBT4118 and BT4119 are separated by 450 nucleotidesBT4119 and BT4120 are separated by 29 nucleotidesBT4120 and BT4121 are separated by 26 nucleotides BT4117: BT4117 - conserved hypothetical protein (NCBI ptt file), at 5,391,544 to 5,392,338 BT4117 BT4118: BT4118 - putative two-component system response regulator, no kinase domain (NCBI ptt file), at 5,392,342 to 5,393,154 BT4118 BT4119: BT4119 - conserved hypothetical protein (NCBI ptt file), at 5,393,605 to 5,395,284 BT4119 BT4120: BT4120 - hypothetical protein (NCBI ptt file), at 5,395,314 to 5,396,981 BT4120 BT4121: BT4121 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 5,397,008 to 5,400,436 BT4121
Group Condition BT4117 BT4118 BT4119 BT4120 BT4121
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -0.7 -1.2 -0.4 -0.3 -0.6
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.2 -0.7 -0.5 -0.4 -0.2
stress BHIS with Dimetridazole 0.0015625 mM -0.3 -1.0 -0.2 -0.2 -0.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -0.7 -0.4 -0.4 -0.1 -0.3
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -0.4 -0.6 -0.3 +0.0 -0.6
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse3 -0.1 -0.1 -0.5 -0.7 -0.4
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 +0.4 -0.4 -0.4 -0.7 -0.5
stress BHIS with Irgasan 0.0125 mM -0.5 -0.7 +0.1 -0.1 -0.3
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 +0.1 -0.4 -0.2 -0.4 -0.6
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse4 -0.5 +0.1 -0.6 -0.2 -0.2
stress BHIS with Dimethyl Sulfoxide 0.1 vol% -0.5 -0.8 +0.4 -0.2 -0.2
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 +0.3 -0.2 -0.4 -0.3 -0.6
stress BHIS with Lincomycin 0.0015625 mM -0.1 -0.8 +0.3 -0.3 -0.3
stress BHIS with Chlorhexidine diacetate salt 0.003125 mM -0.3 -0.8 +0.3 -0.1 -0.1
phage DAC23_cps8_10MOI -0.6 -0.6 -0.2 +0.0 +0.3
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.025 mM +0.1 -0.6 +0.3 -0.4 -0.4
survival aerobic shaking 48 hr copy A -0.8 -0.4 -0.3 +0.4 +0.3
stress BHIS with Sulfaquinoxaline 0.1 mM -0.7 +0.2 +0.3 -0.5 +0.1
control NoPhage -0.9 +0.3 -0.1 -0.1 +0.3
stress BHIS with Trimethoprim 0.0125 mM -0.8 +0.5 -0.2 +0.0 +0.1
carbon source D-Ribose (C) -0.5 +0.6 -0.3 -0.2 +0.2
stress BHIS with Benzethonium chloride 0.003 mM +0.8 -0.7 -0.1 -0.3 -0.0
stress BHIS with Fusidic 0.002 mg/ml +0.6 -0.5 +0.2 -0.3 -0.2
phage ARB14_cps1_0.1MOI -0.2 -0.8 +0.1 +0.5 +0.2
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 -0.2 -0.3 +0.4 +0.5 -0.4
phage DAC16_cps7_1MOI -0.7 +0.5 -0.1 +0.3 +0.1
stress BHIS with Fusidic 0.004 mg/ml +0.7 -0.2 +0.2 -0.3 -0.3
stress BHIS with Fusidic 0.004 mg/ml +1.0 -0.4 -0.1 -0.0 -0.3
stress BHIS with Simvastatin 30 uM +0.7 -0.9 +0.3 +0.2 -0.0
stress BHIS with Simvastatin 30 uM +0.5 -0.3 +0.4 +0.4 +0.2
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