Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4080 and BT4081 are separated by 31 nucleotidesBT4081 and BT4082 are separated by 31 nucleotidesBT4082 and BT4083 are separated by 19 nucleotidesBT4083 and BT4084 are separated by 26 nucleotides BT4080: BT4080 - conserved hypothetical protein (NCBI ptt file), at 5,321,430 to 5,322,800 BT4080 BT4081: BT4081 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 5,322,832 to 5,325,933 BT4081 BT4082: BT4082 - hypothetical protein (NCBI ptt file), at 5,325,965 to 5,328,016 BT4082 BT4083: BT4083 - hypothetical protein (NCBI ptt file), at 5,328,036 to 5,329,064 BT4083 BT4084: BT4084 - hypothetical protein (NCBI ptt file), at 5,329,091 to 5,330,422 BT4084
Group Condition BT4080 BT4081 BT4082 BT4083 BT4084
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 -0.3 -0.3 +0.0 -0.6 -0.2
stress Varel_Bryant_medium_Glucose with Dimetridazole 0.0125 mM -0.5 -0.4 -0.1 -0.4 +0.0
carbon source Maltitol 20mM (C) -0.2 -0.1 -0.3 -0.6 -0.0
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.6 -0.0 +0.3 -0.9 +0.0
carbon source Pullulan; autoclaved 2.5 mg/ml (C) -0.6 -0.2 -0.0 -0.4 -0.0
stress BHIS with Dimethyl Sulfoxide 10 vol% +0.1 +0.0 -0.5 -0.6 -0.1
mouse Post-colonization (Day 4) - Cage1B;Mouse4 -0.4 +0.2 -0.3 -0.5 -0.0
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.2 -0.2 -0.6 -0.2 -0.2
stress BHIS with Fusidic 0.002 mg/ml +0.2 -0.1 -0.3 -0.4 -0.3
stress BHIS with Chloride 350 mM +0.2 -0.1 -0.3 -0.6 -0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.2 +0.2 +0.1 -0.7 -0.1
carbon source Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C) -0.4 -0.2 +0.2 -0.3 +0.1
stress BHIS with Simvastatin 30 uM +0.3 +0.1 +0.2 -0.4 -0.2
stress BHIS with Fusidic 0.004 mg/ml +0.6 -0.1 -0.3 -0.2 +0.1
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -0.6 +0.2 +0.3 +0.1 +0.1
stress BHIS with Doxycycline hyclate 0.0001953125 mM +0.5 -0.2 -0.3 -0.1 +0.2
nitrogen source Ammonium chloride (N) +0.5 +0.2 +0.1 -0.2 -0.3
phage SJC12_cps8_0.1MOI -0.3 +0.5 +0.2 +0.3 -0.0
phage ARB14_cps1_0.1MOI -0.2 +0.6 +0.0 +0.5 -0.0
stress Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7 +0.4 +0.3 +0.3 -0.2 +0.2
stress BHIS with Cephalothin 0.2 mM -0.2 +0.2 +0.3 +0.9 +0.1
stress BHIS with Chlorpromazine 0.2 mM -0.3 +0.3 +0.6 +0.2 +0.4
stress BHIS with Chlorpromazine 0.1 mM -0.1 +0.0 +0.5 +0.4 +0.3
stress BHIS with Trimethoprim 0.00625 mM -0.0 +0.2 +0.4 +0.2 +0.4
stress Varel_Bryant_medium_Glucose with Zinc Pyrithione 0.05 mM +0.6 +0.2 +0.1 +0.0 +0.3
stress Bile salts 0.5 mg/ml +0.3 +0.2 +0.3 +0.3 +0.2
stress BHIS with Paraquat dichloride 0.1 mg/ml +0.5 +0.2 +0.4 +0.2 +0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +0.3 +0.4 +0.3 +0.1
stress BHIS with Trimethoprim 0.0125 mM -0.0 +0.4 +0.4 +0.3 +0.6
stress BHIS with 5-Fluorouracil 0.1 mM -0.0 +0.5 +0.8 +0.5 +0.4
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