Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT4048 and BT4049 are separated by 11 nucleotidesBT4049 and BT4050 are separated by 95 nucleotidesBT4050 and BT4051 are separated by 120 nucleotidesBT4051 and BT4052 are separated by 106 nucleotides BT4048: BT4048 - hypothetical protein (NCBI ptt file), at 5,271,705 to 5,272,826 BT4048 BT4049: BT4049 - putative ArgK protein with ATPase and kinase domains (NCBI ptt file), at 5,272,838 to 5,273,932 BT4049 BT4050: BT4050 - beta-galactosidase (NCBI ptt file), at 5,274,028 to 5,278,056 BT4050 BT4051: BT4051 - conserved hypothetical protein (NCBI ptt file), at 5,278,177 to 5,279,094 BT4051 BT4052: BT4052 - putative ABC transporter ATP-binding protein (NCBI ptt file), at 5,279,201 to 5,281,090 BT4052
Group Condition BT4048 BT4049 BT4050 BT4051 BT4052
mouse_post_colonization Post-colonization (Day 14) - Cage2;Mouse2 -1.2 -3.6 -0.1 -0.1 -0.1
mouse_post_colonization Post-colonization (Day 10) - Cage6;Mouse1 -1.3 -3.8 +0.1 -0.1 +0.0
mouse_post_colonization Post-colonization (Day 10) - Cage2;Mouse1 -1.3 -3.9 -0.0 +0.1 +0.0
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse4 -1.8 -3.2 +0.1 -0.0 +0.0
mouse_post_colonization Post-colonization (Day 8) - Cage7;Mouse1 -1.6 -3.2 +0.1 -0.2 -0.0
stress BHIS with Chlorpromazine 0.1 mM -2.2 -1.7 -0.2 -0.3 -0.1
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse1 -1.3 -3.3 +0.1 -0.0 +0.0
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse3 -1.9 -2.9 +0.0 +0.2 +0.2
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse3 -1.3 -3.4 +0.1 -0.1 +0.2
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse4 -1.6 -2.9 +0.2 +0.0 -0.1
mouse_peg_treatment PEG (Day 2) - Cage3;Mouse3 -1.4 -3.1 -0.0 -0.0 +0.1
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse3 -1.5 -2.9 +0.0 -0.1 +0.0
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse2 -1.1 -3.8 +0.1 +0.2 +0.3
mouse_post_colonization Post-colonization (Day 10) - Cage3;Mouse4 -1.1 -3.4 +0.1 +0.1 -0.0
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM -1.4 -2.6 -0.1 -0.3 +0.1
mouse_post_colonization Post-colonization (Day 12) - Cage1;Mouse5 -1.4 -2.9 +0.1 -0.1 +0.1
mouse_post_colonization Post-colonization (Day 12) - Cage2;Mouse1 -1.5 -2.9 -0.0 -0.1 +0.2
mouse_post_colonization Post-colonization (Day 10) - Cage5;Mouse3 -1.3 -2.8 +0.1 -0.2 +0.0
mouse_post_colonization Post-colonization (Day 10) - Cage4;Mouse1 -1.4 -3.3 +0.0 +0.2 +0.2
mouse_post_colonization Post-colonization (Day 14) - Cage1;Mouse1 -1.4 -3.2 -0.1 +0.2 +0.4
mouse_post_colonization Post-colonization (Day 8) - Cage4;Mouse5 -1.3 -2.9 -0.1 +0.2 +0.0
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 -1.7 -2.5 +0.1 -0.3 +0.4
mouse_peg_treatment PEG (Day 1) - Cage2;Mouse1 -1.6 -3.0 -0.1 +0.2 +0.4
mouse_peg_treatment PEG (Day 1) - Cage3;Mouse1 -1.1 -3.1 +0.0 -0.1 +0.4
mouse_post_colonization Post-colonization (Day 10) - Cage1;Mouse2 -1.3 -3.1 +0.3 +0.1 +0.2
mouse_post_colonization Post-colonization (Day 14) - Cage5;Mouse1 -1.4 -2.6 +0.2 -0.2 +0.3
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse2 -1.4 -2.8 +0.1 +0.3 +0.2
mouse_post_colonization Post-colonization (Day 8) - Cage4;Mouse4 -1.4 -2.8 +0.1 +0.3 +0.2
mouse_post_colonization Post-colonization (Day 8) - Cage3;Mouse1 -1.2 -3.2 +0.1 +0.4 +0.4
mouse_post_colonization Post-colonization (Day 12) - Cage3;Mouse4 -1.0 -2.9 +0.2 -0.1 +0.3
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