Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 868 experiments or choose conditions or try the comparative fitness browser

500 ntBT3993 and BT3994 are separated by 27 nucleotidesBT3994 and BT3995 are separated by 232 nucleotidesBT3995 and BT3996 are separated by 107 nucleotidesBT3996 and BT3997 are separated by 21 nucleotides BT3993: BT3993 - RNA polymerase ECF-type sigma factor (NCBI ptt file), at 5,202,354 to 5,202,908 BT3993 BT3994: BT3994 - putative alpha-1,2-mannosidase (NCBI ptt file), at 5,202,936 to 5,205,167 BT3994 BT3995: BT3995 - alanyl-tRNA synthetase (NCBI ptt file), at 5,205,400 to 5,208,018 BT3995 BT3996: BT3996 - putative peptidase (NCBI ptt file), at 5,208,126 to 5,209,094 BT3996 BT3997: BT3997 - transcriptional regulator (NCBI ptt file), at 5,209,116 to 5,209,457 BT3997
Group Condition BT3993 BT3994 BT3995 BT3996 BT3997
mouse_post_colonization Post-colonization (Day 12) - Cage7;Mouse1 -0.3 -0.4 N.D. -1.2 N.D.
stress BHIS with Cephalothin 0.1 mM -0.0 -0.2 N.D. -1.4 N.D.
mouse_peg_treatment PEG (Day 1) - Cage4;Mouse1 -0.3 -0.0 N.D. -1.3 N.D.
stress BHIS with Cephalothin 0.625 mg/ml +0.5 +0.1 N.D. -2.0 N.D.
stress Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM -0.2 +0.1 N.D. -1.4 N.D.
stress BHIS with Cefoxitin 0.025 mM -0.3 +0.4 N.D. -1.6 N.D.
mouse_post_colonization Post-colonization (Day 10) - Cage7;Mouse2 -0.5 -0.2 N.D. -0.7 N.D.
mouse Post-colonization (Day 7) - Cage1A;Mouse1 -0.9 -0.0 N.D. -0.4 N.D.
mouse_recovery_after_peg Post-colonization (Day 14) - Cage4;Mouse2 -0.5 +0.3 N.D. -1.0 N.D.
stress Bile salts 0.5 mg/ml +0.2 -0.0 N.D. -1.3 N.D.
carbon source Mannan from Saccharomyces cerevisiae (C) -0.4 -0.8 N.D. +0.2 N.D.
stress BHIS with Cephalothin 0.625 mg/ml +0.4 +0.2 N.D. -1.6 N.D.
mouse_peg_treatment PEG (Day 3) - Cage2;Mouse1 +0.3 +0.1 N.D. -1.3 N.D.
stress Varel_Bryant_medium_Glucose with Cephalothin 0.1 mM -0.0 +0.3 N.D. -1.1 N.D.
stress BHIS with Sulfaquinoxaline 0.1 mM -0.1 +0.3 N.D. -1.1 N.D.
stress BHIS with Trimethoprim 0.00625 mM +0.1 +0.2 N.D. -1.1 N.D.
stress BHIS with Simvastatin 30 uM +0.5 +0.0 N.D. -1.1 N.D.
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 -0.1 +0.6 N.D. -1.1 N.D.
stress BHIS with Trimethoprim 0.00625 mM +0.0 +0.7 N.D. -1.1 N.D.
stress BHIS with Thioridazine 0.025 mM -0.2 +0.5 N.D. -0.8 N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.2 +0.4 N.D. -0.7 N.D.
mouse_coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 +0.4 +0.3 N.D. -0.7 N.D.
stress BHIS with Sulfamonomethoxine 0.2 mM +0.4 +0.4 N.D. -0.6 N.D.
stress BHIS with Irgasan 0.0125 mM +0.5 +0.5 N.D. -0.4 N.D.
carbon source (+)-Arabinogalactan (C) -0.4 +0.4 N.D. +0.6 N.D.
stress BHIS with Doxycycline hyclate 0.0001953125 mM -0.3 +0.0 N.D. +1.1 N.D.
carbon source Hyaluronic from Streptococcus equi +1.3 +0.1 N.D. -0.0 N.D.
stress BHIS with Fusidic 0.004 mg/ml +0.5 +0.1 N.D. +0.8 N.D.
carbon source Hyaluronic from Streptococcus equi +1.1 +0.1 N.D. +0.4 N.D.
stress BHIS with Fusidic 0.004 mg/ml +0.3 +0.2 N.D. +1.3 N.D.
remove
BT3993
plot		 remove
BT3994
plot		 remove
BT3995		 remove
BT3996
plot		 remove
BT3997
plot