Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3920 and BT3921 are separated by 42 nucleotidesBT3921 and BT3922 are separated by 25 nucleotidesBT3922 and BT3923 are separated by 7 nucleotidesBT3923 and BT3924 are separated by 0 nucleotides BT3920: BT3920 - conserved hypothetical protein (NCBI ptt file), at 5,094,547 to 5,094,876 BT3920 BT3921: BT3921 - hypothetical protein (NCBI ptt file), at 5,094,919 to 5,095,797 BT3921 BT3922: BT3922 - putative ThiJ family intracellular protease/amidase (NCBI ptt file), at 5,095,823 to 5,096,374 BT3922 BT3923: BT3923 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (NCBI ptt file), at 5,096,382 to 5,097,041 BT3923 BT3924: BT3924 - ATP-dependent DNA helicase recG (NCBI ptt file), at 5,097,042 to 5,099,138 BT3924
Group Condition BT3920 BT3921 BT3922 BT3923 BT3924
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.7 -2.8 -2.1 N.D. N.D.
carbon source Mannan from Saccharomyces cerevisiae (C) -0.4 -3.1 -1.7 N.D. N.D.
mouse_post_colonization Post-colonization (Day 12) - Cage4;Mouse5 -3.6 -0.1 -1.5 N.D. N.D.
carbon source Mannan from Saccharomyces cerevisiae (C) -0.2 -2.6 -1.9 N.D. N.D.
carbon source Heparin from porcine intestinal mucosa (C) -1.0 -2.7 -1.1 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml -2.3 -2.0 -0.1 N.D. N.D.
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -1.7 -2.9 +0.1 N.D. N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage3;Mouse1 -2.2 -0.3 -1.9 N.D. N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -2.2 -1.9 +0.1 N.D. N.D.
stress Varel_Bryant_medium_Glucose with Sulfamethizole 0.1 mM -2.3 -0.4 -1.3 N.D. N.D.
mouse_peg_treatment PEG (Day 3) - Cage3;Mouse2 -2.8 +0.3 -1.5 N.D. N.D.
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -1.1 -2.2 -0.3 N.D. N.D.
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +0.4 -2.4 -1.6 N.D. N.D.
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -1.3 -2.5 +0.3 N.D. N.D.
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -1.0 -2.4 -0.2 N.D. N.D.
carbon source (+)-Arabinogalactan (C) -1.8 -1.8 +0.2 N.D. N.D.
mouse_post_colonization Post-colonization (Day 8) - Cage5;Mouse2 -1.8 -0.3 -1.2 N.D. N.D.
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen -0.5 -2.8 -0.0 N.D. N.D.
stress BHIS with Dimetridazole 0.00625 mM -1.4 -0.9 -1.0 N.D. N.D.
mouse_post_colonization Post-colonization (Day 8) - Cage6;Mouse2 -1.7 +0.5 -2.1 N.D. N.D.
mouse_peg_treatment PEG (Day 2) - Cage5;Mouse1 -1.8 +0.3 -1.7 N.D. N.D.
carbon source Mannan from Saccharomyces cerevisiae; filtered 2.5 mg/ml (C) +0.2 -2.0 -1.2 N.D. N.D.
stress BHIS with Ceftazidime 0.5 mg/ml -2.8 +0.6 -0.6 N.D. N.D.
stress BHIS with Chlorpromazine 0.2 mM -1.0 +0.3 -2.1 N.D. N.D.
mouse_peg_treatment PEG (Day 1 ) - Cage1;Mouse5 -1.8 +0.6 -1.2 N.D. N.D.
phage SJC12_cps8_0.1MOI +0.6 -1.1 -1.8 N.D. N.D.
mouse_post_colonization Post-colonization (Day 14) - Cage7;Mouse3 -1.1 +0.8 -2.0 N.D. N.D.
stress BHIS with Deoxycholic 0.2 mg/ml -2.4 +0.9 +0.6 N.D. N.D.
stress BHIS with Thioridazine 0.0125 mM +1.3 +0.2 -2.0 N.D. N.D.
stress BHIS with Thioridazine 0.0125 mM +1.8 +1.5 -0.0 N.D. N.D.
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