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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT3899 and BT3900 overlap by 2 nucleotides
BT3900 and BT3901 are separated by 115 nucleotides
BT3901 and BT3902 are separated by 121 nucleotides
BT3902 and BT3903 overlap by 1 nucleotides
BT3899: BT3899 - transcriptional regulator (NCBI ptt file), at 5,071,518 to 5,071,883
BT3899
BT3900: BT3900 - hypothetical protein (NCBI ptt file), at 5,071,882 to 5,072,115
BT3900
BT3901: BT3901 - hypothetical protein (NCBI ptt file), at 5,072,231 to 5,072,887
BT3901
BT3902: BT3902 - conserved hypothetical protein (NCBI ptt file), at 5,073,009 to 5,074,268
BT3902
BT3903: BT3903 - conserved hypothetical protein (NCBI ptt file), at 5,074,268 to 5,075,449
BT3903
Group
Condition
BT3899
BT3900
BT3901
BT3902
BT3903
stress
BHIS with Chlorpromazine 0.1 mM
-0.5
-0.8
-1.0
-3.5
-4.0
stress
BHIS with Chlorpromazine 0.2 mM
-1.6
-0.1
-0.8
-3.1
-3.0
stress
BHIS with Thioridazine 0.0125 mM
-0.7
-0.7
-0.8
-3.2
-2.6
stress
BHIS with Thioridazine 0.025 mM
-0.5
-0.8
-0.6
-2.3
-2.1
stress
Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM
-0.1
-0.4
+0.2
-2.6
-3.2
stress
BHIS with Chlorpromazine 0.1 mM
-0.5
-0.1
-0.2
-2.7
-2.4
stress
BHIS with Thioridazine 0.0125 mM
-0.9
+0.1
-0.8
-2.1
-2.0
stress
BHIS with Chlorpromazine 0.2 mM
-0.3
-0.6
-0.3
-1.7
-1.9
stress
BHIS with Zinc Pyrithione 0.025 mM
-0.4
+0.0
-0.3
-1.8
-1.8
stress
Varel_Bryant_medium_Glucose with 8-hydroxy-nitroquinoline 0.05 mM
-0.2
-0.5
-0.1
-1.7
-1.7
stress
Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
-0.1
-0.6
-0.2
-1.5
-1.2
stress
Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.000048828125 mM
-0.1
-0.3
-0.0
-1.5
-1.5
stress
Varel_Bryant_medium_Glucose with Doxycycline hyclate 0.0001953125 mM
+0.4
-1.0
-0.2
-1.2
-1.4
carbon source
L-Rhamnose (C)
-0.2
-1.1
-0.3
-0.7
-0.8
stress
BHIS with Zinc Pyrithione 0.05 mM
-0.2
+0.3
-0.5
-1.3
-0.9
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
+0.2
-1.1
+0.1
-1.0
-1.0
stress
BHIS with sodium fluoride 30 mM
-0.1
+0.9
+0.1
-1.9
-1.4
stress
Varel_Bryant_medium_Glucose with Oxytetracycline 0.0001953125 mM
+0.6
-0.7
-0.1
-1.1
-1.1
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
-0.5
+0.7
+0.0
-1.1
-1.1
stress
BHIS with Simvastatin 30 uM
-0.2
+1.2
-0.6
-1.2
-1.1
nitrogen source
L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
-0.9
+0.7
+0.3
-0.7
-1.1
stress
Varel_Bryant_medium_Glucose with Thioridazine 0.025 mM
+0.5
+0.6
+0.1
-1.2
-1.3
stress
BHIS with Simvastatin 30 uM
+0.5
+0.6
-0.2
-1.2
-0.9
stress
BHIS with Dimethyl Sulfoxide 9 vol%
+0.2
+0.1
+0.6
-1.1
-1.1
stress
BHIS with Vancomycin 0.016 mg/ml
+0.9
+0.8
-0.2
-0.9
-0.4
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.5
+0.7
+0.5
-0.5
-0.9
stress
BHIS with Vancomycin 0.016 mg/ml
+0.7
+1.2
-0.2
-0.9
-0.2
mouse_post_colonization
Post-colonization (Day 14) - Cage1;Mouse3
+1.2
+0.7
+1.0
-0.2
+0.1
mouse_post_colonization
Post-colonization (Day 12) - Cage3;Mouse4
+0.6
+1.6
+0.4
-0.2
+0.4
stress
Varel_Bryant_medium_Glucose with Bile salts 0.5 mg/mL; pH 7
+1.3
+1.0
-0.2
+0.8
+0.8
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