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Protein
Homologs
Fitness for 5 genes in
Bacteroides thetaiotaomicron VPI-5482
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BT3675 and BT3676 are separated by 211 nucleotides
BT3676 and BT3677 overlap by 4 nucleotides
BT3677 and BT3678 are separated by 233 nucleotides
BT3678 and BT3679 are separated by 638 nucleotides
BT3675: BT3675 - endo-1,4-beta-xylanase D precursor (NCBI ptt file), at 4,768,720 to 4,769,721
BT3675
BT3676: BT3676 - hypothetical protein (NCBI ptt file), at 4,769,933 to 4,771,693
BT3676
BT3677: BT3677 - conserved hypothetical protein (NCBI ptt file), at 4,771,690 to 4,773,711
BT3677
BT3678: BT3678 - two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file), at 4,773,945 to 4,778,090
BT3678
BT3679: BT3679 - conserved hypothetical protein, with a conserved domain (NCBI ptt file), at 4,778,729 to 4,780,021
BT3679
Group
Condition
BT3675
BT3676
BT3677
BT3678
BT3679
stress
BHIS with Paraquat dichloride 0.1 mg/ml
-0.6
-0.0
-0.5
+0.0
-0.3
stress
BHIS with Lincomycin 0.0015625 mM
-0.5
-0.4
+0.0
-0.2
-0.1
stress
BHIS with Paraquat dichloride 0.1 mg/ml
-0.3
-0.1
-0.6
+0.0
-0.2
stress
BHIS with Antimycin A 0.2 mM
-0.4
-0.1
+0.1
+0.0
-0.6
carbon source
Mannan from Saccharomyces cerevisiae (C)
+0.0
-0.4
-0.6
+0.0
-0.0
stress
BHIS with Simvastatin 30 uM
-0.1
-0.1
-0.2
-0.2
-0.3
stress
BHIS with Antimycin A 0.1 mM
-0.2
-0.2
+0.1
-0.1
-0.4
stress
Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.05 mM
-0.2
-0.1
-0.1
+0.1
-0.4
stress
BHIS with Anhydrotetracycline 0.00078125 mM
-0.4
-0.2
+0.1
+0.1
-0.2
stress
BHIS with Irgasan 0.0125 mM
-0.3
-0.1
+0.1
+0.1
-0.5
stress
Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM
+0.1
-0.0
-0.3
+0.2
-0.3
stress
BHIS with Doxycycline hyclate 0.000390625 mM
-0.4
-0.2
+0.1
+0.3
-0.1
stress
BHIS with Rifampicin 0.000048828125 mM
-0.2
-0.2
+0.2
+0.2
-0.2
carbon source
(+)-Arabinogalactan (C)
+0.2
+0.2
+0.0
-0.1
-0.5
nitrogen source
L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.1
+0.4
-0.0
+0.2
-0.5
stress
Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml
+0.3
+0.3
-0.2
+0.0
-0.3
stress
Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM
+0.2
+0.2
-0.4
+0.1
+0.0
stress
BHIS with Thioridazine 0.0125 mM
-0.1
+0.2
-0.3
+0.2
+0.3
stress
Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM
+0.2
-0.1
-0.1
+0.3
+0.3
nitrogen source
L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
+0.4
+0.2
-0.3
-0.1
+0.3
mouse_peg_treatment
PEG (Day 2) - Cage4;Mouse1
+0.3
+0.1
+0.3
+0.3
-0.3
phage
SJC12_cps8_0.1MOI
+0.3
+0.1
-0.2
+0.0
+0.4
stress
Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM
+0.3
+0.0
-0.2
+0.3
+0.3
stress
BHIS with Trimethoprim 0.00625 mM
-0.1
+0.2
+0.2
+0.3
+0.3
stress
BHIS with Fusidic 0.002 mg/ml
+0.5
+0.2
+0.2
-0.1
+0.1
stress
Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM
+0.6
+0.2
+0.0
+0.1
-0.0
stress
BHIS with Dimethyl Sulfoxide 9 vol%
+0.4
+0.1
-0.0
+0.2
+0.3
phage
SJC16_cps8_10MOI
+0.4
+0.3
-0.0
+0.2
+0.2
survival
aerobic shaking 48 hr copy A
+0.2
-0.1
+0.2
+0.1
+0.6
stress
BHIS with Cephalothin 0.2 mM
+0.1
+0.5
+0.5
+0.1
+0.0
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