Fitness for 5 genes in Bacteroides thetaiotaomicron VPI-5482

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500 ntBT3675 and BT3676 are separated by 211 nucleotidesBT3676 and BT3677 overlap by 4 nucleotidesBT3677 and BT3678 are separated by 233 nucleotidesBT3678 and BT3679 are separated by 638 nucleotides BT3675: BT3675 - endo-1,4-beta-xylanase D precursor (NCBI ptt file), at 4,768,720 to 4,769,721 BT3675 BT3676: BT3676 - hypothetical protein (NCBI ptt file), at 4,769,933 to 4,771,693 BT3676 BT3677: BT3677 - conserved hypothetical protein (NCBI ptt file), at 4,771,690 to 4,773,711 BT3677 BT3678: BT3678 - two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file), at 4,773,945 to 4,778,090 BT3678 BT3679: BT3679 - conserved hypothetical protein, with a conserved domain (NCBI ptt file), at 4,778,729 to 4,780,021 BT3679
Group Condition BT3675 BT3676 BT3677 BT3678 BT3679
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.6 -0.0 -0.5 +0.0 -0.3
stress BHIS with Lincomycin 0.0015625 mM -0.5 -0.4 +0.0 -0.2 -0.1
stress BHIS with Paraquat dichloride 0.1 mg/ml -0.3 -0.1 -0.6 +0.0 -0.2
stress BHIS with Antimycin A 0.2 mM -0.4 -0.1 +0.1 +0.0 -0.6
carbon source Mannan from Saccharomyces cerevisiae (C) +0.0 -0.4 -0.6 +0.0 -0.0
stress BHIS with Simvastatin 30 uM -0.1 -0.1 -0.2 -0.2 -0.3
stress BHIS with Antimycin A 0.1 mM -0.2 -0.2 +0.1 -0.1 -0.4
stress Varel_Bryant_medium_Glucose with Ciprofloxacin Hydrochloride 0.05 mM -0.2 -0.1 -0.1 +0.1 -0.4
stress BHIS with Anhydrotetracycline 0.00078125 mM -0.4 -0.2 +0.1 +0.1 -0.2
stress BHIS with Irgasan 0.0125 mM -0.3 -0.1 +0.1 +0.1 -0.5
stress Varel_Bryant_medium_Glucose with Chlorpromazine 0.1 mM +0.1 -0.0 -0.3 +0.2 -0.3
stress BHIS with Doxycycline hyclate 0.000390625 mM -0.4 -0.2 +0.1 +0.3 -0.1
stress BHIS with Rifampicin 0.000048828125 mM -0.2 -0.2 +0.2 +0.2 -0.2
carbon source (+)-Arabinogalactan (C) +0.2 +0.2 +0.0 -0.1 -0.5
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.1 +0.4 -0.0 +0.2 -0.5
stress Varel_Bryant_medium_Glucose with Chenodeoxycholic 0.5 mg/ml +0.3 +0.3 -0.2 +0.0 -0.3
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.2 mM +0.2 +0.2 -0.4 +0.1 +0.0
stress BHIS with Thioridazine 0.0125 mM -0.1 +0.2 -0.3 +0.2 +0.3
stress Varel_Bryant_medium_Glucose with Trimethoprim 0.025 mM +0.2 -0.1 -0.1 +0.3 +0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +0.2 -0.3 -0.1 +0.3
mouse_peg_treatment PEG (Day 2) - Cage4;Mouse1 +0.3 +0.1 +0.3 +0.3 -0.3
phage SJC12_cps8_0.1MOI +0.3 +0.1 -0.2 +0.0 +0.4
stress Varel_Bryant_medium_Glucose with Furaltadone 0.1 mM +0.3 +0.0 -0.2 +0.3 +0.3
stress BHIS with Trimethoprim 0.00625 mM -0.1 +0.2 +0.2 +0.3 +0.3
stress BHIS with Fusidic 0.002 mg/ml +0.5 +0.2 +0.2 -0.1 +0.1
stress Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM +0.6 +0.2 +0.0 +0.1 -0.0
stress BHIS with Dimethyl Sulfoxide 9 vol% +0.4 +0.1 -0.0 +0.2 +0.3
phage SJC16_cps8_10MOI +0.4 +0.3 -0.0 +0.2 +0.2
survival aerobic shaking 48 hr copy A +0.2 -0.1 +0.2 +0.1 +0.6
stress BHIS with Cephalothin 0.2 mM +0.1 +0.5 +0.5 +0.1 +0.0
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